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ODAM (odontogenic, ameloblast asssociated)

Identity

Other namesAPIN
HGNC (Hugo) ODAM
LocusID (NCBI) 54959
Location 4q13.3
Location_base_pair Starts at 71062244 and ends at 71070293 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)ODAM   26043
Entrez_Gene (NCBI)ODAM  54959  odontogenic, ameloblast asssociated
Cards
GeneCards (Weizmann)ODAM
Ensembl (Hinxton)ENSG00000109205 [Gene_View]  chr4:71062244-71070293 [Contig_View]  ODAM [Vega]
AceView (NCBI)ODAM
Genatlas (Paris)ODAM
SOURCE (Stanford)NM_017855
Genomic and cartography
GoldenPath (UCSC)ODAM  -  4q13.3   chr4:71062244-71070293 +  4q13.3   [Description]    (hg19-Feb_2009)
EnsemblODAM - 4q13.3 [CytoView]
Mapping of homologs : NCBIODAM [Mapview]
OMIM614843   
Gene and transcription
Genbank (Entrez)AA025290 AK000520 AK098169 AK225547 BC017796
RefSeq transcript (SRS)NM_017855
RefSeq transcript (Entrez)NM_017855
RefSeq genomic (SRS)AC_000136 NC_000004 NC_018915 NT_022778 NW_001838914 NW_004078021
RefSeq genomic (Entrez)AC_000136 NC_000004 NC_018915 NT_022778 NW_001838914 NW_004078021
Consensus coding sequences : CCDS (NCBI)ODAM
Cluster EST : UnigeneHs.143811 [ SRS ] Hs.143811 [ NCBI ]
CGAP (NCI)Hs.143811
Alternative Splicing : Fast-db (Paris)GSHG0022633
Alternative Splicing GalleryENSG00000109205
Gene ExpressionODAM [ NCBI-GEO ]   ODAM [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtA1E959 (SRS) A1E959 (Uniprot)
NextProtA1E959
With graphics : InterProA1E959
Splice isoforms : SwissVarA1E959(Swissvar)
Domains : Interpro (SRS)Odam   
Domains : Interpro (EBI)Odam   
Related proteins : CluSTrA1E959
Domain families : Pfam (SRS)
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
DMDM54959
Blocks (Seattle)A1E959
Human Protein AtlasENSG00000109205
HPRD13376
IPIIPI00152784   IPI00966301   IPI00968302   IPI00967233   
Protein Interaction databases
DIP (DOE-UCLA)A1E959
IntAct (EBI)A1E959
FunCoupENSG00000109205
REACTOMEODAM
Protein Interaction Database54959
BioGRIDODAM
InParanoidA1E959
Interologous Interaction database A1E959
IntegromeDBODAM
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)ODAM
SNP (GeneSNP Utah)ODAM
SNP : HGBaseODAM
Genetic variants : HAPMAPODAM
Somatic Mutations in Cancer : COSMICODAM 
CONAN: Copy Number AnalysisODAM 
Mutations and Diseases : HGMDODAM
OMIM614843   
GENETests614843   
Disease Genetic AssociationODAM
Huge Navigator ODAM [HugePedia]  ODAM [HugeCancerGEM]
Genomic VariantsODAM  ODAM [DGVbeta]
ClinVarODAM
snp3D : Map Gene to Disease54959
General knowledge
Homologs : HomoloGeneODAM
Homology/Alignments : Family Browser (UCSC)ODAM
Phylogenetic Trees/Animal Genes : TreeFamODAM
Chemical/Protein Interactions : CTD54959
Chemical/Pharm GKB GenePA145148342
Clinical trialODAM
Cancer Resource (Charite)ENSG00000109205
Ontology : AmiGOextracellular region  biomineral tissue development  odontogenesis of dentin-containing tooth  fibril  
Ontology : EGO-EBIextracellular region  biomineral tissue development  odontogenesis of dentin-containing tooth  fibril  
Other databases
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
PubGeneODAM
iHOPODAM
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jun 14 17:49:19 CEST 2013
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