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OLFML3 (olfactomedin-like 3)

Identity

Alias_namesolfactomedin-like 3
Alias_symbol (synonym)HNOEL-iso
OLF44
Other alias
HGNC (Hugo) OLFML3
LocusID (NCBI) 56944
Atlas_Id 71117
Location 1p13.2  [Link to chromosome band 1p13]
Location_base_pair Starts at 114522013 and ends at 114524876 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
OLFML3 (1p13.2) / NEB (2q23.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OLFML3   24956
Cards
Entrez_Gene (NCBI)OLFML3  56944  olfactomedin-like 3
AliasesHNOEL-iso; OLF44
GeneCards (Weizmann)OLFML3
Ensembl hg19 (Hinxton)ENSG00000116774 [Gene_View]  chr1:114522013-114524876 [Contig_View]  OLFML3 [Vega]
Ensembl hg38 (Hinxton)ENSG00000116774 [Gene_View]  chr1:114522013-114524876 [Contig_View]  OLFML3 [Vega]
ICGC DataPortalENSG00000116774
TCGA cBioPortalOLFML3
AceView (NCBI)OLFML3
Genatlas (Paris)OLFML3
WikiGenes56944
SOURCE (Princeton)OLFML3
Genetics Home Reference (NIH)OLFML3
Genomic and cartography
GoldenPath hg19 (UCSC)OLFML3  -     chr1:114522013-114524876 +  1p13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)OLFML3  -     1p13.2   [Description]    (hg38-Dec_2013)
EnsemblOLFML3 - 1p13.2 [CytoView hg19]  OLFML3 - 1p13.2 [CytoView hg38]
Mapping of homologs : NCBIOLFML3 [Mapview hg19]  OLFML3 [Mapview hg38]
OMIM610088   
Gene and transcription
Genbank (Entrez)AF201945 AI559543 AK075353 AK075369 AK075479
RefSeq transcript (Entrez)NM_001286352 NM_001286353 NM_020190
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_032977 NW_004929290
Consensus coding sequences : CCDS (NCBI)OLFML3
Cluster EST : UnigeneHs.9315 [ NCBI ]
CGAP (NCI)Hs.9315
Alternative Splicing GalleryENSG00000116774
Gene ExpressionOLFML3 [ NCBI-GEO ]   OLFML3 [ EBI - ARRAY_EXPRESS ]   OLFML3 [ SEEK ]   OLFML3 [ MEM ]
Gene Expression Viewer (FireBrowse)OLFML3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)56944
GTEX Portal (Tissue expression)OLFML3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NRN5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NRN5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NRN5
Splice isoforms : SwissVarQ9NRN5
PhosPhoSitePlusQ9NRN5
Domaine pattern : Prosite (Expaxy)OLF (PS51132)   
Domains : Interpro (EBI)Olfac-like   
Domain families : Pfam (Sanger)OLF (PF02191)   
Domain families : Pfam (NCBI)pfam02191   
Domain families : Smart (EMBL)OLF (SM00284)  
Conserved Domain (NCBI)OLFML3
DMDM Disease mutations56944
Blocks (Seattle)OLFML3
SuperfamilyQ9NRN5
Human Protein AtlasENSG00000116774
Peptide AtlasQ9NRN5
HPRD14878
IPIIPI00024621   IPI00607652   IPI00385893   
Protein Interaction databases
DIP (DOE-UCLA)Q9NRN5
IntAct (EBI)Q9NRN5
FunCoupENSG00000116774
BioGRIDOLFML3
STRING (EMBL)OLFML3
ZODIACOLFML3
Ontologies - Pathways
QuickGOQ9NRN5
Ontology : AmiGOmulticellular organismal development  extracellular vesicle  
Ontology : EGO-EBImulticellular organismal development  extracellular vesicle  
NDEx NetworkOLFML3
Atlas of Cancer Signalling NetworkOLFML3
Wikipedia pathwaysOLFML3
Orthology - Evolution
OrthoDB56944
GeneTree (enSembl)ENSG00000116774
Phylogenetic Trees/Animal Genes : TreeFamOLFML3
HOVERGENQ9NRN5
HOGENOMQ9NRN5
Homologs : HomoloGeneOLFML3
Homology/Alignments : Family Browser (UCSC)OLFML3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOLFML3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OLFML3
dbVarOLFML3
ClinVarOLFML3
1000_GenomesOLFML3 
Exome Variant ServerOLFML3
ExAC (Exome Aggregation Consortium)OLFML3 (select the gene name)
Genetic variants : HAPMAP56944
Genomic Variants (DGV)OLFML3 [DGVbeta]
DECIPHER (Syndromes)1:114522013-114524876  ENSG00000116774
CONAN: Copy Number AnalysisOLFML3 
Mutations
ICGC Data PortalOLFML3 
TCGA Data PortalOLFML3 
Broad Tumor PortalOLFML3
OASIS PortalOLFML3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOLFML3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOLFML3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OLFML3
DgiDB (Drug Gene Interaction Database)OLFML3
DoCM (Curated mutations)OLFML3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OLFML3 (select a term)
intoGenOLFML3
Cancer3DOLFML3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610088   
Orphanet
MedgenOLFML3
Genetic Testing Registry OLFML3
NextProtQ9NRN5 [Medical]
TSGene56944
GENETestsOLFML3
Huge Navigator OLFML3 [HugePedia]
snp3D : Map Gene to Disease56944
BioCentury BCIQOLFML3
ClinGenOLFML3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD56944
Chemical/Pharm GKB GenePA134913777
Clinical trialOLFML3
Miscellaneous
canSAR (ICR)OLFML3 (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOLFML3
EVEXOLFML3
GoPubMedOLFML3
iHOPOLFML3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:35:51 CET 2017

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