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OPCML-IT1 (OPCML intronic transcript 1)

Identity

Alias_namesOPCML intronic transcript 1 (non-protein coding)
Other alias-
HGNC (Hugo) OPCML-IT1
LocusID (NCBI) 100874333
Atlas_Id 71127
Location 11q25  [Link to chromosome band 11q25]
Location_base_pair Starts at 133360029 and ends at 133366080 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)OPCML-IT1   41366
Cards
Entrez_Gene (NCBI)OPCML-IT1  100874333  OPCML intronic transcript 1
Aliases
GeneCards (Weizmann)OPCML-IT1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr11:133360029-133366080 [Contig_View]  OPCML-IT1 [Vega]
TCGA cBioPortalOPCML-IT1
AceView (NCBI)OPCML-IT1
Genatlas (Paris)OPCML-IT1
WikiGenes100874333
SOURCE (Princeton)OPCML-IT1
Genetics Home Reference (NIH)OPCML-IT1
Genomic and cartography
GoldenPath hg38 (UCSC)OPCML-IT1  -     chr11:133360029-133366080 -  11q25   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OPCML-IT1  -     11q25   [Description]    (hg19-Feb_2009)
EnsemblOPCML-IT1 - 11q25 [CytoView hg19]  OPCML-IT1 - 11q25 [CytoView hg38]
Mapping of homologs : NCBIOPCML-IT1 [Mapview hg19]  OPCML-IT1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK056505
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OPCML-IT1
Cluster EST : UnigeneHs.680573 [ NCBI ]
CGAP (NCI)Hs.680573
Gene ExpressionOPCML-IT1 [ NCBI-GEO ]   OPCML-IT1 [ EBI - ARRAY_EXPRESS ]   OPCML-IT1 [ SEEK ]   OPCML-IT1 [ MEM ]
Gene Expression Viewer (FireBrowse)OPCML-IT1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874333
GTEX Portal (Tissue expression)OPCML-IT1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OPCML-IT1
DMDM Disease mutations100874333
Blocks (Seattle)OPCML-IT1
Protein Interaction databases
BioGRIDOPCML-IT1
STRING (EMBL)OPCML-IT1
ZODIACOPCML-IT1
Ontologies - Pathways
Huge Navigator OPCML-IT1 [HugePedia]
snp3D : Map Gene to Disease100874333
BioCentury BCIQOPCML-IT1
ClinGenOPCML-IT1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874333
Clinical trialOPCML-IT1
Miscellaneous
canSAR (ICR)OPCML-IT1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOPCML-IT1
EVEXOPCML-IT1
GoPubMedOPCML-IT1
iHOPOPCML-IT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 11:45:55 CEST 2017

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