OPTN (optineurin)

Identity

Other names	FIP2
	GLC1E
	HIP7
	HYPL
	NRP
	TFIIIA-INTP
HGNC	OPTN
Location	10p14
Location_base_pair	Starts at 13182088 and ends at 13220282 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	OPTN   17142
Entrez_Gene	OPTN  10133  optineurin
	Cards
GeneCards	OPTN
Ensembl	OPTN [Search_View]   ENSG00000123240 [Gene_View]
Genatlas	OPTN
GeneLynx	OPTN
eGenome	OPTN
euGene	10133
	Genomic and cartography
GoldenPath	OPTN  -  10p14   chr10:13182088-13220282 +  10p13   [Description]    (hg18-March_2006)
Ensembl	OPTN - 10p13 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	OPTN
	Gene and transcription
Genbank	AF049614 [ ENTREZ ]
Genbank	AF061034 [ ENTREZ ]
Genbank	AF061034 [ ENTREZ ]
Genbank	AF070533 [ ENTREZ ]
Genbank	AF420371 [ ENTREZ ]
RefSeq	NM_001008211 [ SRS ]    NM_001008211 [ ENTREZ ]
RefSeq	NM_001008212 [ SRS ]    NM_001008212 [ ENTREZ ]
RefSeq	NM_001008213 [ SRS ]    NM_001008213 [ ENTREZ ]
RefSeq	NM_021980 [ SRS ]    NM_021980 [ ENTREZ ]
RefSeq	AC_000053 [ SRS ]    AC_000053 [ ENTREZ ]
RefSeq	AC_000142 [ SRS ]    AC_000142 [ ENTREZ ]
RefSeq	NC_000010 [ SRS ]    NC_000010 [ ENTREZ ]
RefSeq	NT_077569 [ SRS ]    NT_077569 [ ENTREZ ]
RefSeq	NW_001837931 [ SRS ]    NW_001837931 [ ENTREZ ]
RefSeq	NW_924584 [ SRS ]    NW_924584 [ ENTREZ ]
AceView	OPTN AceView - NCBI
Unigene	Hs.332706 [ SRS ]    Hs.332706 [ NCBI ]     HS332706 [ spliceNest ]
Fast-db	2975 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q96CV9 [ SRS]    Q96CV9 [ EXPASY ]     Q96CV9 [ INTERPRO ]     Q96CV9 [ UNIPROT ]
CluSTr	Q96CV9
Blocks	Q96CV9
HPRD	03891
	Protein Interaction databases
DIP	Q96CV9
IntAct	Q96CV9
	Polymorphism : SNP, mutations, diseases
OMIM	137760;602432;606657    [ map ]
GENECLINICS	137760;602432;606657
SNP	OPTN [dbSNP-NCBI]
SNP	NM_001008211 [SNP-NCI]
SNP	NM_001008212 [SNP-NCI]
SNP	NM_001008213 [SNP-NCI]
SNP	NM_021980 [SNP-NCI]
SNP	OPTN [GeneSNPs - Utah]  OPTN] [HGBASE - SRS]
HAPMAP	OPTN [HAPMAP]
HGMD	OPTN
	General knowledge
Family Browser	OPTN [UCSC Family Browser]
SOURCE	NM_001008211
SOURCE	NM_001008212
SOURCE	NM_001008213
SOURCE	NM_021980
SMD	Hs.332706
SAGE	Hs.332706
GO	protein targeting to Golgi [Amigo]  protein targeting to Golgi
GO	cytoplasm [Amigo]  cytoplasm
GO	Golgi apparatus [Amigo]  Golgi apparatus
GO	Golgi organization and biogenesis [Amigo]  Golgi organization and biogenesis
GO	signal transduction [Amigo]  signal transduction
GO	protein C-terminus binding [Amigo]  protein C-terminus binding
GO	cell death [Amigo]  cell death
GO	Golgi to plasma membrane protein transport [Amigo]  Golgi to plasma membrane protein transport
PubGene	OPTN
TreeFam	OPTN
CTD	10133 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	OPTN Related clones (RZPD - Berlin)
	PubMed
PubMed	60 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Tue Oct 14 20:46:00 2008