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OR10A2 (olfactory receptor family 10 subfamily A member 2)

Identity

Alias_namesOR10A2P
olfactory receptor, family 10, subfamily A, member 2
Alias_symbol (synonym)OST363
Other aliasOR11-82
OR11-86
HGNC (Hugo) OR10A2
LocusID (NCBI) 341276
Atlas_Id 71139
Location 11p15.4  [Link to chromosome band 11p15]
Location_base_pair Starts at 6869755 and ends at 6870666 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR10A2   8161
Cards
Entrez_Gene (NCBI)OR10A2  341276  olfactory receptor family 10 subfamily A member 2
AliasesOR10A2P; OR11-82; OR11-86; OST363
GeneCards (Weizmann)OR10A2
Ensembl hg19 (Hinxton)ENSG00000170790 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000170790 [Gene_View]  chr11:6869755-6870666 [Contig_View]  OR10A2 [Vega]
ICGC DataPortalENSG00000170790
TCGA cBioPortalOR10A2
AceView (NCBI)OR10A2
Genatlas (Paris)OR10A2
WikiGenes341276
SOURCE (Princeton)OR10A2
Genetics Home Reference (NIH)OR10A2
Genomic and cartography
GoldenPath hg38 (UCSC)OR10A2  -     chr11:6869755-6870666 +  11p15.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR10A2  -     11p15.4   [Description]    (hg19-Feb_2009)
EnsemblOR10A2 - 11p15.4 [CytoView hg19]  OR10A2 - 11p15.4 [CytoView hg38]
Mapping of homologs : NCBIOR10A2 [Mapview hg19]  OR10A2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC136955
RefSeq transcript (Entrez)NM_001004460
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR10A2
Cluster EST : UnigeneHs.371762 [ NCBI ]
CGAP (NCI)Hs.371762
Alternative Splicing GalleryENSG00000170790
Gene ExpressionOR10A2 [ NCBI-GEO ]   OR10A2 [ EBI - ARRAY_EXPRESS ]   OR10A2 [ SEEK ]   OR10A2 [ MEM ]
Gene Expression Viewer (FireBrowse)OR10A2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)341276
GTEX Portal (Tissue expression)OR10A2
Human Protein AtlasENSG00000170790-OR10A2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H208   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H208  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H208
Splice isoforms : SwissVarQ9H208
PhosPhoSitePlusQ9H208
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR10A2
DMDM Disease mutations341276
Blocks (Seattle)OR10A2
SuperfamilyQ9H208
Human Protein Atlas [tissue]ENSG00000170790-OR10A2 [tissue]
Peptide AtlasQ9H208
HPRD17663
IPIIPI00300587   
Protein Interaction databases
DIP (DOE-UCLA)Q9H208
IntAct (EBI)Q9H208
FunCoupENSG00000170790
BioGRIDOR10A2
STRING (EMBL)OR10A2
ZODIACOR10A2
Ontologies - Pathways
QuickGOQ9H208
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR10A2
Atlas of Cancer Signalling NetworkOR10A2
Wikipedia pathwaysOR10A2
Orthology - Evolution
OrthoDB341276
GeneTree (enSembl)ENSG00000170790
Phylogenetic Trees/Animal Genes : TreeFamOR10A2
HOVERGENQ9H208
HOGENOMQ9H208
Homologs : HomoloGeneOR10A2
Homology/Alignments : Family Browser (UCSC)OR10A2
Gene fusions - Rearrangements
Fusion: Tumor Portal OR10A2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR10A2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR10A2
dbVarOR10A2
ClinVarOR10A2
1000_GenomesOR10A2 
Exome Variant ServerOR10A2
ExAC (Exome Aggregation Consortium)ENSG00000170790
GNOMAD BrowserENSG00000170790
Genetic variants : HAPMAP341276
Genomic Variants (DGV)OR10A2 [DGVbeta]
DECIPHEROR10A2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR10A2 
Mutations
ICGC Data PortalOR10A2 
TCGA Data PortalOR10A2 
Broad Tumor PortalOR10A2
OASIS PortalOR10A2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR10A2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR10A2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR10A2
DgiDB (Drug Gene Interaction Database)OR10A2
DoCM (Curated mutations)OR10A2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR10A2 (select a term)
intoGenOR10A2
Cancer3DOR10A2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR10A2
Genetic Testing Registry OR10A2
NextProtQ9H208 [Medical]
TSGene341276
GENETestsOR10A2
Target ValidationOR10A2
Huge Navigator OR10A2 [HugePedia]
snp3D : Map Gene to Disease341276
BioCentury BCIQOR10A2
ClinGenOR10A2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD341276
Chemical/Pharm GKB GenePA31950
Clinical trialOR10A2
Miscellaneous
canSAR (ICR)OR10A2 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR10A2
EVEXOR10A2
GoPubMedOR10A2
iHOPOR10A2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:19:55 CET 2017

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