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OR10A5 (olfactory receptor family 10 subfamily A member 5)

Identity

Alias_namesOR10A1
olfactory receptor, family 10, subfamily A, member 5
Alias_symbol (synonym)OR11-403
JCG6
Other alias
HGNC (Hugo) OR10A5
LocusID (NCBI) 144124
Atlas_Id 71142
Location 11p15.4  [Link to chromosome band 11p15]
Location_base_pair Starts at 6845683 and ends at 6846636 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR10A5   15131
Cards
Entrez_Gene (NCBI)OR10A5  144124  olfactory receptor family 10 subfamily A member 5
AliasesJCG6; OR10A1; OR11-403
GeneCards (Weizmann)OR10A5
Ensembl hg19 (Hinxton)ENSG00000166363 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000166363 [Gene_View]  chr11:6845683-6846636 [Contig_View]  OR10A5 [Vega]
ICGC DataPortalENSG00000166363
TCGA cBioPortalOR10A5
AceView (NCBI)OR10A5
Genatlas (Paris)OR10A5
WikiGenes144124
SOURCE (Princeton)OR10A5
Genetics Home Reference (NIH)OR10A5
Genomic and cartography
GoldenPath hg38 (UCSC)OR10A5  -     chr11:6845683-6846636 +  11p15.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR10A5  -     11p15.4   [Description]    (hg19-Feb_2009)
EnsemblOR10A5 - 11p15.4 [CytoView hg19]  OR10A5 - 11p15.4 [CytoView hg38]
Mapping of homologs : NCBIOR10A5 [Mapview hg19]  OR10A5 [Mapview hg38]
OMIM608493   
Gene and transcription
Genbank (Entrez)AF324499 BC093651 BC093653
RefSeq transcript (Entrez)NM_178168
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR10A5
Cluster EST : UnigeneHs.447478 [ NCBI ]
CGAP (NCI)Hs.447478
Alternative Splicing GalleryENSG00000166363
Gene ExpressionOR10A5 [ NCBI-GEO ]   OR10A5 [ EBI - ARRAY_EXPRESS ]   OR10A5 [ SEEK ]   OR10A5 [ MEM ]
Gene Expression Viewer (FireBrowse)OR10A5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)144124
GTEX Portal (Tissue expression)OR10A5
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H207   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H207  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H207
Splice isoforms : SwissVarQ9H207
PhosPhoSitePlusQ9H207
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR10A5
DMDM Disease mutations144124
Blocks (Seattle)OR10A5
SuperfamilyQ9H207
Human Protein AtlasENSG00000166363
Peptide AtlasQ9H207
HPRD16339
IPIIPI00744748   IPI00022326   
Protein Interaction databases
DIP (DOE-UCLA)Q9H207
IntAct (EBI)Q9H207
FunCoupENSG00000166363
BioGRIDOR10A5
STRING (EMBL)OR10A5
ZODIACOR10A5
Ontologies - Pathways
QuickGOQ9H207
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  sensory perception of smell  integral component of membrane  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  sensory perception of smell  integral component of membrane  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR10A5
Atlas of Cancer Signalling NetworkOR10A5
Wikipedia pathwaysOR10A5
Orthology - Evolution
OrthoDB144124
GeneTree (enSembl)ENSG00000166363
Phylogenetic Trees/Animal Genes : TreeFamOR10A5
HOVERGENQ9H207
HOGENOMQ9H207
Homologs : HomoloGeneOR10A5
Homology/Alignments : Family Browser (UCSC)OR10A5
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR10A5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR10A5
dbVarOR10A5
ClinVarOR10A5
1000_GenomesOR10A5 
Exome Variant ServerOR10A5
ExAC (Exome Aggregation Consortium)OR10A5 (select the gene name)
Genetic variants : HAPMAP144124
Genomic Variants (DGV)OR10A5 [DGVbeta]
DECIPHEROR10A5 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR10A5 
Mutations
ICGC Data PortalOR10A5 
TCGA Data PortalOR10A5 
Broad Tumor PortalOR10A5
OASIS PortalOR10A5 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR10A5  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR10A5
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR10A5
DgiDB (Drug Gene Interaction Database)OR10A5
DoCM (Curated mutations)OR10A5 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR10A5 (select a term)
intoGenOR10A5
Cancer3DOR10A5(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608493   
Orphanet
MedgenOR10A5
Genetic Testing Registry OR10A5
NextProtQ9H207 [Medical]
TSGene144124
GENETestsOR10A5
Target ValidationOR10A5
Huge Navigator OR10A5 [HugePedia]
snp3D : Map Gene to Disease144124
BioCentury BCIQOR10A5
ClinGenOR10A5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD144124
Chemical/Pharm GKB GenePA31953
Clinical trialOR10A5
Miscellaneous
canSAR (ICR)OR10A5 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR10A5
EVEXOR10A5
GoPubMedOR10A5
iHOPOR10A5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:32:42 CEST 2017

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