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OR10AC1 (olfactory receptor family 10 subfamily AC member 1 (gene/pseudogene))

Identity

Alias_namesOR10AC1P
olfactory receptor, family 10, subfamily AC, member 1 pseudogene
olfactory receptor, family 10, subfamily AC, member 1 (gene/pseudogene)
Other alias
HGNC (Hugo) OR10AC1
LocusID (NCBI) 392133
Atlas_Id 79609
Location 7q35  [Link to chromosome band 7q35]
Location_base_pair Starts at 143510867 and ends at 143512011 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR10AC1   14758
Cards
Entrez_Gene (NCBI)OR10AC1  392133  olfactory receptor family 10 subfamily AC member 1 (gene/pseudogene)
AliasesOR10AC1P
GeneCards (Weizmann)OR10AC1
Ensembl hg19 (Hinxton)ENSG00000176510 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000176510 [Gene_View]  chr7:143510867-143512011 [Contig_View]  OR10AC1 [Vega]
ICGC DataPortalENSG00000176510
TCGA cBioPortalOR10AC1
AceView (NCBI)OR10AC1
Genatlas (Paris)OR10AC1
WikiGenes392133
SOURCE (Princeton)OR10AC1
Genetics Home Reference (NIH)OR10AC1
Genomic and cartography
GoldenPath hg38 (UCSC)OR10AC1  -     chr7:143510867-143512011 -  7q35   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR10AC1  -     7q35   [Description]    (hg19-Feb_2009)
EnsemblOR10AC1 - 7q35 [CytoView hg19]  OR10AC1 - 7q35 [CytoView hg38]
Mapping of homologs : NCBIOR10AC1 [Mapview hg19]  OR10AC1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001348289
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR10AC1
Alternative Splicing GalleryENSG00000176510
Gene ExpressionOR10AC1 [ NCBI-GEO ]   OR10AC1 [ EBI - ARRAY_EXPRESS ]   OR10AC1 [ SEEK ]   OR10AC1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR10AC1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)392133
GTEX Portal (Tissue expression)OR10AC1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NH08   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NH08  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NH08
Splice isoforms : SwissVarQ8NH08
PhosPhoSitePlusQ8NH08
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR10AC1
DMDM Disease mutations392133
Blocks (Seattle)OR10AC1
SuperfamilyQ8NH08
Human Protein AtlasENSG00000176510
Peptide AtlasQ8NH08
IPIIPI00169089   
Protein Interaction databases
DIP (DOE-UCLA)Q8NH08
IntAct (EBI)Q8NH08
FunCoupENSG00000176510
BioGRIDOR10AC1
STRING (EMBL)OR10AC1
ZODIACOR10AC1
Ontologies - Pathways
QuickGOQ8NH08
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
NDEx NetworkOR10AC1
Atlas of Cancer Signalling NetworkOR10AC1
Wikipedia pathwaysOR10AC1
Orthology - Evolution
OrthoDB392133
GeneTree (enSembl)ENSG00000176510
Phylogenetic Trees/Animal Genes : TreeFamOR10AC1
HOVERGENQ8NH08
HOGENOMQ8NH08
Homologs : HomoloGeneOR10AC1
Homology/Alignments : Family Browser (UCSC)OR10AC1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR10AC1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR10AC1
dbVarOR10AC1
ClinVarOR10AC1
1000_GenomesOR10AC1 
Exome Variant ServerOR10AC1
ExAC (Exome Aggregation Consortium)OR10AC1 (select the gene name)
Genetic variants : HAPMAP392133
Genomic Variants (DGV)OR10AC1 [DGVbeta]
DECIPHEROR10AC1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR10AC1 
Mutations
ICGC Data PortalOR10AC1 
TCGA Data PortalOR10AC1 
Broad Tumor PortalOR10AC1
OASIS PortalOR10AC1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDOR10AC1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR10AC1
DgiDB (Drug Gene Interaction Database)OR10AC1
DoCM (Curated mutations)OR10AC1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR10AC1 (select a term)
intoGenOR10AC1
Cancer3DOR10AC1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR10AC1
Genetic Testing Registry OR10AC1
NextProtQ8NH08 [Medical]
TSGene392133
GENETestsOR10AC1
Target ValidationOR10AC1
Huge Navigator OR10AC1 [HugePedia]
snp3D : Map Gene to Disease392133
BioCentury BCIQOR10AC1
ClinGenOR10AC1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD392133
Chemical/Pharm GKB GenePA31958
Clinical trialOR10AC1
Miscellaneous
canSAR (ICR)OR10AC1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR10AC1
EVEXOR10AC1
GoPubMedOR10AC1
iHOPOR10AC1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:32:42 CEST 2017

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