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OR10AD1 (olfactory receptor family 10 subfamily AD member 1)

Identity

Alias_namesOR10AD1P
olfactory receptor, family 10, subfamily AD, member 1 pseudogene
olfactory receptor, family 10, subfamily AD, member 1
Other aliasOR12-1
HGNC (Hugo) OR10AD1
LocusID (NCBI) 121275
Atlas_Id 71145
Location 12q13.11  [Link to chromosome band 12q13]
Location_base_pair Starts at 48202339 and ends at 48203292 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR10AD1   14819
Cards
Entrez_Gene (NCBI)OR10AD1  121275  olfactory receptor family 10 subfamily AD member 1
AliasesOR10AD1P; OR12-1
GeneCards (Weizmann)OR10AD1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr12:48202339-48203292 [Contig_View]  OR10AD1 [Vega]
TCGA cBioPortalOR10AD1
AceView (NCBI)OR10AD1
Genatlas (Paris)OR10AD1
WikiGenes121275
SOURCE (Princeton)OR10AD1
Genetics Home Reference (NIH)OR10AD1
Genomic and cartography
GoldenPath hg38 (UCSC)OR10AD1  -     chr12:48202339-48203292 -  12q13.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR10AD1  -     12q13.11   [Description]    (hg19-Feb_2009)
EnsemblOR10AD1 - 12q13.11 [CytoView hg19]  OR10AD1 - 12q13.11 [CytoView hg38]
Mapping of homologs : NCBIOR10AD1 [Mapview hg19]  OR10AD1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC136757 BC136758
RefSeq transcript (Entrez)NM_001004134
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR10AD1
Cluster EST : UnigeneHs.446790 [ NCBI ]
CGAP (NCI)Hs.446790
Gene ExpressionOR10AD1 [ NCBI-GEO ]   OR10AD1 [ EBI - ARRAY_EXPRESS ]   OR10AD1 [ SEEK ]   OR10AD1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR10AD1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)121275
GTEX Portal (Tissue expression)OR10AD1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGE0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGE0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGE0
Splice isoforms : SwissVarQ8NGE0
PhosPhoSitePlusQ8NGE0
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR10AD1
DMDM Disease mutations121275
Blocks (Seattle)OR10AD1
SuperfamilyQ8NGE0
Peptide AtlasQ8NGE0
HPRD11812
IPIIPI00061858   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGE0
IntAct (EBI)Q8NGE0
BioGRIDOR10AD1
STRING (EMBL)OR10AD1
ZODIACOR10AD1
Ontologies - Pathways
QuickGOQ8NGE0
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR10AD1
Atlas of Cancer Signalling NetworkOR10AD1
Wikipedia pathwaysOR10AD1
Orthology - Evolution
OrthoDB121275
Phylogenetic Trees/Animal Genes : TreeFamOR10AD1
HOVERGENQ8NGE0
HOGENOMQ8NGE0
Homologs : HomoloGeneOR10AD1
Homology/Alignments : Family Browser (UCSC)OR10AD1
Gene fusions - Rearrangements
Fusion: Tumor Portal OR10AD1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR10AD1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR10AD1
dbVarOR10AD1
ClinVarOR10AD1
1000_GenomesOR10AD1 
Exome Variant ServerOR10AD1
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP121275
Genomic Variants (DGV)OR10AD1 [DGVbeta]
DECIPHEROR10AD1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR10AD1 
Mutations
ICGC Data PortalOR10AD1 
TCGA Data PortalOR10AD1 
Broad Tumor PortalOR10AD1
OASIS PortalOR10AD1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR10AD1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR10AD1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR10AD1
DgiDB (Drug Gene Interaction Database)OR10AD1
DoCM (Curated mutations)OR10AD1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR10AD1 (select a term)
intoGenOR10AD1
Cancer3DOR10AD1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR10AD1
Genetic Testing Registry OR10AD1
NextProtQ8NGE0 [Medical]
TSGene121275
GENETestsOR10AD1
Target ValidationOR10AD1
Huge Navigator OR10AD1 [HugePedia]
snp3D : Map Gene to Disease121275
BioCentury BCIQOR10AD1
ClinGenOR10AD1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD121275
Chemical/Pharm GKB GenePA31959
Clinical trialOR10AD1
Miscellaneous
canSAR (ICR)OR10AD1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR10AD1
EVEXOR10AD1
GoPubMedOR10AD1
iHOPOR10AD1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:19:57 CET 2017

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