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OR10AG1 (olfactory receptor family 10 subfamily AG member 1)

Identity

Alias (NCBI)OR11-160
HGNC (Hugo) OR10AG1
HGNC Previous nameolfactory receptor, family 10, subfamily AG, member 1
LocusID (NCBI) 282770
Atlas_Id 71146
Location 11q12.1  [Link to chromosome band 11q12]
Location_base_pair Starts at 55967558 and ends at 55968463 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)OR10AG1   19607
Cards
Entrez_Gene (NCBI)OR10AG1    olfactory receptor family 10 subfamily AG member 1
AliasesOR11-160
GeneCards (Weizmann)OR10AG1
Ensembl hg19 (Hinxton)ENSG00000174970 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000174970 [Gene_View]  ENSG00000174970 [Sequence]  chr11:55967558-55968463 [Contig_View]  OR10AG1 [Vega]
ICGC DataPortalENSG00000174970
TCGA cBioPortalOR10AG1
AceView (NCBI)OR10AG1
Genatlas (Paris)OR10AG1
SOURCE (Princeton)OR10AG1
Genetics Home Reference (NIH)OR10AG1
Genomic and cartography
GoldenPath hg38 (UCSC)OR10AG1  -     chr11:55967558-55968463 -  11q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR10AG1  -     11q12.1   [Description]    (hg19-Feb_2009)
GoldenPathOR10AG1 - 11q12.1 [CytoView hg19]  OR10AG1 - 11q12.1 [CytoView hg38]
ImmunoBaseENSG00000174970
genome Data Viewer NCBIOR10AG1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BC136890 BC136891
RefSeq transcript (Entrez)NM_001005491
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR10AG1
Alternative Splicing GalleryENSG00000174970
Gene ExpressionOR10AG1 [ NCBI-GEO ]   OR10AG1 [ EBI - ARRAY_EXPRESS ]   OR10AG1 [ SEEK ]   OR10AG1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR10AG1 [ Firebrowse - Broad ]
GenevisibleExpression of OR10AG1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)282770
GTEX Portal (Tissue expression)OR10AG1
Human Protein AtlasENSG00000174970-OR10AG1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NH19   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NH19  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NH19
Splice isoforms : SwissVarQ8NH19
PhosPhoSitePlusQ8NH19
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)7tm_4 (PF13853)   
Domain families : Pfam (NCBI)pfam13853   
Conserved Domain (NCBI)OR10AG1
Blocks (Seattle)OR10AG1
SuperfamilyQ8NH19
Human Protein Atlas [tissue]ENSG00000174970-OR10AG1 [tissue]
Peptide AtlasQ8NH19
HPRD14885
IPIIPI00303621   
Protein Interaction databases
DIP (DOE-UCLA)Q8NH19
IntAct (EBI)Q8NH19
BioGRIDOR10AG1
STRING (EMBL)OR10AG1
ZODIACOR10AG1
Ontologies - Pathways
QuickGOQ8NH19
Ontology : AmiGOG protein-coupled receptor activity  olfactory receptor activity  plasma membrane  G protein-coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG protein-coupled receptor activity  olfactory receptor activity  plasma membrane  G protein-coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
NDEx NetworkOR10AG1
Atlas of Cancer Signalling NetworkOR10AG1
Wikipedia pathwaysOR10AG1
Orthology - Evolution
OrthoDB282770
GeneTree (enSembl)ENSG00000174970
Phylogenetic Trees/Animal Genes : TreeFamOR10AG1
HOGENOMQ8NH19
Homologs : HomoloGeneOR10AG1
Homology/Alignments : Family Browser (UCSC)OR10AG1
Gene fusions - Rearrangements
Fusion : QuiverOR10AG1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR10AG1 [hg38]
dbVarOR10AG1
ClinVarOR10AG1
MonarchOR10AG1
1000_GenomesOR10AG1 
Exome Variant ServerOR10AG1
GNOMAD BrowserENSG00000174970
Varsome BrowserOR10AG1
Genomic Variants (DGV)OR10AG1 [DGVbeta]
DECIPHEROR10AG1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR10AG1 
Mutations
ICGC Data PortalOR10AG1 
TCGA Data PortalOR10AG1 
Broad Tumor PortalOR10AG1
OASIS PortalOR10AG1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR10AG1  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DOR10AG1
Mutations and Diseases : HGMDOR10AG1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR10AG1
DgiDB (Drug Gene Interaction Database)OR10AG1
DoCM (Curated mutations)OR10AG1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR10AG1 (select a term)
intoGenOR10AG1
Cancer3DOR10AG1(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETOR10AG1
MedgenOR10AG1
Genetic Testing Registry OR10AG1
NextProtQ8NH19 [Medical]
GENETestsOR10AG1
Target ValidationOR10AG1
Huge Navigator OR10AG1 [HugePedia]
ClinGenOR10AG1
Clinical trials, drugs, therapy
MyCancerGenomeOR10AG1
Protein Interactions : CTD
Pharm GKB GenePA134929321
Clinical trialOR10AG1
Miscellaneous
canSAR (ICR)OR10AG1 (select the gene name)
HarmonizomeOR10AG1
DataMed IndexOR10AG1
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR10AG1
EVEXOR10AG1
GoPubMedOR10AG1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Dec 5 17:20:01 CET 2020

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