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OR10G4 (olfactory receptor family 10 subfamily G member 4)

Identity

Alias_namesolfactory receptor, family 10, subfamily G, member 4
Other aliasOR11-278
HGNC (Hugo) OR10G4
LocusID (NCBI) 390264
Atlas_Id 71152
Location 11q24.2  [Link to chromosome band 11q24]
Location_base_pair Starts at 124015575 and ends at 124016510 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR10G4   14809
Cards
Entrez_Gene (NCBI)OR10G4  390264  olfactory receptor family 10 subfamily G member 4
AliasesOR11-278
GeneCards (Weizmann)OR10G4
Ensembl hg19 (Hinxton)ENSG00000254737 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000254737 [Gene_View]  chr11:124015575-124016510 [Contig_View]  OR10G4 [Vega]
ICGC DataPortalENSG00000254737
TCGA cBioPortalOR10G4
AceView (NCBI)OR10G4
Genatlas (Paris)OR10G4
WikiGenes390264
SOURCE (Princeton)OR10G4
Genetics Home Reference (NIH)OR10G4
Genomic and cartography
GoldenPath hg38 (UCSC)OR10G4  -     chr11:124015575-124016510 +  11q24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR10G4  -     11q24.2   [Description]    (hg19-Feb_2009)
EnsemblOR10G4 - 11q24.2 [CytoView hg19]  OR10G4 - 11q24.2 [CytoView hg38]
Mapping of homologs : NCBIOR10G4 [Mapview hg19]  OR10G4 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001004462
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR10G4
Cluster EST : UnigeneHs.553760 [ NCBI ]
CGAP (NCI)Hs.553760
Alternative Splicing GalleryENSG00000254737
Gene ExpressionOR10G4 [ NCBI-GEO ]   OR10G4 [ EBI - ARRAY_EXPRESS ]   OR10G4 [ SEEK ]   OR10G4 [ MEM ]
Gene Expression Viewer (FireBrowse)OR10G4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)390264
GTEX Portal (Tissue expression)OR10G4
Human Protein AtlasENSG00000254737-OR10G4 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGN3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGN3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGN3
Splice isoforms : SwissVarQ8NGN3
PhosPhoSitePlusQ8NGN3
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR10G4
DMDM Disease mutations390264
Blocks (Seattle)OR10G4
SuperfamilyQ8NGN3
Human Protein Atlas [tissue]ENSG00000254737-OR10G4 [tissue]
Peptide AtlasQ8NGN3
HPRD14889
IPIIPI00169067   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGN3
IntAct (EBI)Q8NGN3
FunCoupENSG00000254737
BioGRIDOR10G4
STRING (EMBL)OR10G4
ZODIACOR10G4
Ontologies - Pathways
QuickGOQ8NGN3
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR10G4
Atlas of Cancer Signalling NetworkOR10G4
Wikipedia pathwaysOR10G4
Orthology - Evolution
OrthoDB390264
GeneTree (enSembl)ENSG00000254737
Phylogenetic Trees/Animal Genes : TreeFamOR10G4
HOVERGENQ8NGN3
HOGENOMQ8NGN3
Homologs : HomoloGeneOR10G4
Homology/Alignments : Family Browser (UCSC)OR10G4
Gene fusions - Rearrangements
Fusion: Tumor Portal OR10G4
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR10G4 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR10G4
dbVarOR10G4
ClinVarOR10G4
1000_GenomesOR10G4 
Exome Variant ServerOR10G4
ExAC (Exome Aggregation Consortium)ENSG00000254737
GNOMAD BrowserENSG00000254737
Genetic variants : HAPMAP390264
Genomic Variants (DGV)OR10G4 [DGVbeta]
DECIPHEROR10G4 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR10G4 
Mutations
ICGC Data PortalOR10G4 
TCGA Data PortalOR10G4 
Broad Tumor PortalOR10G4
OASIS PortalOR10G4 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR10G4  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR10G4
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR10G4
DgiDB (Drug Gene Interaction Database)OR10G4
DoCM (Curated mutations)OR10G4 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR10G4 (select a term)
intoGenOR10G4
Cancer3DOR10G4(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR10G4
Genetic Testing Registry OR10G4
NextProtQ8NGN3 [Medical]
TSGene390264
GENETestsOR10G4
Target ValidationOR10G4
Huge Navigator OR10G4 [HugePedia]
snp3D : Map Gene to Disease390264
BioCentury BCIQOR10G4
ClinGenOR10G4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD390264
Chemical/Pharm GKB GenePA31971
Clinical trialOR10G4
Miscellaneous
canSAR (ICR)OR10G4 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR10G4
EVEXOR10G4
GoPubMedOR10G4
iHOPOR10G4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:19:58 CET 2017

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