Atlas of Genetics and Cytogenetics in Oncology and Haematology

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OR10G9 (olfactory receptor family 10 subfamily G member 9)

Identity

Alias_namesOR10G10P
olfactory receptor, family 10, subfamily G, member 9
Other alias
HGNC (Hugo) OR10G9
LocusID (NCBI) 219870
Atlas_Id 71155
Location 11q24.2  [Link to chromosome band 11q24]
Location_base_pair Starts at 124023013 and ends at 124023948 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)OR10G9   15129
Cards
Entrez_Gene (NCBI)OR10G9  219870  olfactory receptor family 10 subfamily G member 9
AliasesOR10G10P
GeneCards (Weizmann)OR10G9
Ensembl hg19 (Hinxton)ENSG00000236981 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000236981 [Gene_View]  ENSG00000236981 [Sequence]  chr11:124023013-124023948 [Contig_View]  OR10G9 [Vega]
ICGC DataPortalENSG00000236981
TCGA cBioPortalOR10G9
AceView (NCBI)OR10G9
Genatlas (Paris)OR10G9
WikiGenes219870
SOURCE (Princeton)OR10G9
Genetics Home Reference (NIH)OR10G9
Genomic and cartography
GoldenPath hg38 (UCSC)OR10G9  -     chr11:124023013-124023948 +  11q24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR10G9  -     11q24.2   [Description]    (hg19-Feb_2009)
GoldenPathOR10G9 - 11q24.2 [CytoView hg19]  OR10G9 - 11q24.2 [CytoView hg38]
ImmunoBaseENSG00000236981
Mapping of homologs : NCBIOR10G9 [Mapview hg19]  OR10G9 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001001953
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR10G9
Cluster EST : UnigeneHs.553636 [ NCBI ]
CGAP (NCI)Hs.553636
Alternative Splicing GalleryENSG00000236981
Gene ExpressionOR10G9 [ NCBI-GEO ]   OR10G9 [ EBI - ARRAY_EXPRESS ]   OR10G9 [ SEEK ]   OR10G9 [ MEM ]
Gene Expression Viewer (FireBrowse)OR10G9 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)219870
GTEX Portal (Tissue expression)OR10G9
Human Protein AtlasENSG00000236981-OR10G9 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGN4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGN4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGN4
Splice isoforms : SwissVarQ8NGN4
PhosPhoSitePlusQ8NGN4
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR10G9
DMDM Disease mutations219870
Blocks (Seattle)OR10G9
SuperfamilyQ8NGN4
Human Protein Atlas [tissue]ENSG00000236981-OR10G9 [tissue]
Peptide AtlasQ8NGN4
HPRD17666
IPIIPI00169068   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGN4
IntAct (EBI)Q8NGN4
FunCoupENSG00000236981
BioGRIDOR10G9
STRING (EMBL)OR10G9
ZODIACOR10G9
Ontologies - Pathways
QuickGOQ8NGN4
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
NDEx NetworkOR10G9
Atlas of Cancer Signalling NetworkOR10G9
Wikipedia pathwaysOR10G9
Orthology - Evolution
OrthoDB219870
GeneTree (enSembl)ENSG00000236981
Phylogenetic Trees/Animal Genes : TreeFamOR10G9
HOGENOMQ8NGN4
Homologs : HomoloGeneOR10G9
Homology/Alignments : Family Browser (UCSC)OR10G9
Gene fusions - Rearrangements
Fusion : QuiverOR10G9
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR10G9 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR10G9
dbVarOR10G9
ClinVarOR10G9
1000_GenomesOR10G9 
Exome Variant ServerOR10G9
ExAC (Exome Aggregation Consortium)ENSG00000236981
GNOMAD BrowserENSG00000236981
Varsome BrowserOR10G9
Genetic variants : HAPMAP219870
Genomic Variants (DGV)OR10G9 [DGVbeta]
DECIPHEROR10G9 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR10G9 
Mutations
ICGC Data PortalOR10G9 
TCGA Data PortalOR10G9 
Broad Tumor PortalOR10G9
OASIS PortalOR10G9 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR10G9  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR10G9
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR10G9
DgiDB (Drug Gene Interaction Database)OR10G9
DoCM (Curated mutations)OR10G9 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR10G9 (select a term)
intoGenOR10G9
Cancer3DOR10G9(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETOR10G9
MedgenOR10G9
Genetic Testing Registry OR10G9
NextProtQ8NGN4 [Medical]
TSGene219870
GENETestsOR10G9
Target ValidationOR10G9
Huge Navigator OR10G9 [HugePedia]
snp3D : Map Gene to Disease219870
BioCentury BCIQOR10G9
ClinGenOR10G9
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD219870
Chemical/Pharm GKB GenePA31976
Clinical trialOR10G9
Miscellaneous
canSAR (ICR)OR10G9 (select the gene name)
DataMed IndexOR10G9
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR10G9
EVEXOR10G9
GoPubMedOR10G9
iHOPOR10G9
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri Jun 7 17:41:09 CEST 2019
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