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OR10H1 (olfactory receptor family 10 subfamily H member 1)

Identity

Alias_namesolfactory receptor, family 10, subfamily H, member 1
Other alias-
HGNC (Hugo) OR10H1
LocusID (NCBI) 26539
Atlas_Id 71156
Location 19p13.12  [Link to chromosome band 19p13]
Location_base_pair Starts at 15807007 and ends at 15808126 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR10H1   8172
Cards
Entrez_Gene (NCBI)OR10H1  26539  olfactory receptor family 10 subfamily H member 1
Aliases
GeneCards (Weizmann)OR10H1
Ensembl hg19 (Hinxton)ENSG00000186723 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000186723 [Gene_View]  chr19:15807007-15808126 [Contig_View]  OR10H1 [Vega]
ICGC DataPortalENSG00000186723
TCGA cBioPortalOR10H1
AceView (NCBI)OR10H1
Genatlas (Paris)OR10H1
WikiGenes26539
SOURCE (Princeton)OR10H1
Genetics Home Reference (NIH)OR10H1
Genomic and cartography
GoldenPath hg38 (UCSC)OR10H1  -     chr19:15807007-15808126 -  19p13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR10H1  -     19p13.12   [Description]    (hg19-Feb_2009)
EnsemblOR10H1 - 19p13.12 [CytoView hg19]  OR10H1 - 19p13.12 [CytoView hg38]
Mapping of homologs : NCBIOR10H1 [Mapview hg19]  OR10H1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC130360 BC132969 HQ258605
RefSeq transcript (Entrez)NM_013940
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR10H1
Cluster EST : UnigeneHs.533925 [ NCBI ]
CGAP (NCI)Hs.533925
Alternative Splicing GalleryENSG00000186723
Gene ExpressionOR10H1 [ NCBI-GEO ]   OR10H1 [ EBI - ARRAY_EXPRESS ]   OR10H1 [ SEEK ]   OR10H1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR10H1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26539
GTEX Portal (Tissue expression)OR10H1
Human Protein AtlasENSG00000186723-OR10H1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y4A9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y4A9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y4A9
Splice isoforms : SwissVarQ9Y4A9
PhosPhoSitePlusQ9Y4A9
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR10H1
DMDM Disease mutations26539
Blocks (Seattle)OR10H1
SuperfamilyQ9Y4A9
Human Protein Atlas [tissue]ENSG00000186723-OR10H1 [tissue]
Peptide AtlasQ9Y4A9
HPRD17667
IPIIPI00000636   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y4A9
IntAct (EBI)Q9Y4A9
FunCoupENSG00000186723
BioGRIDOR10H1
STRING (EMBL)OR10H1
ZODIACOR10H1
Ontologies - Pathways
QuickGOQ9Y4A9
Ontology : AmiGOolfactory receptor activity  G-protein coupled serotonin receptor activity  plasma membrane  integral component of membrane  neurotransmitter receptor activity  detection of chemical stimulus involved in sensory perception of smell  G-protein coupled serotonin receptor signaling pathway  
Ontology : EGO-EBIolfactory receptor activity  G-protein coupled serotonin receptor activity  plasma membrane  integral component of membrane  neurotransmitter receptor activity  detection of chemical stimulus involved in sensory perception of smell  G-protein coupled serotonin receptor signaling pathway  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR10H1
Atlas of Cancer Signalling NetworkOR10H1
Wikipedia pathwaysOR10H1
Orthology - Evolution
OrthoDB26539
GeneTree (enSembl)ENSG00000186723
Phylogenetic Trees/Animal Genes : TreeFamOR10H1
HOVERGENQ9Y4A9
HOGENOMQ9Y4A9
Homologs : HomoloGeneOR10H1
Homology/Alignments : Family Browser (UCSC)OR10H1
Gene fusions - Rearrangements
Tumor Fusion PortalOR10H1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR10H1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR10H1
dbVarOR10H1
ClinVarOR10H1
1000_GenomesOR10H1 
Exome Variant ServerOR10H1
ExAC (Exome Aggregation Consortium)ENSG00000186723
GNOMAD BrowserENSG00000186723
Genetic variants : HAPMAP26539
Genomic Variants (DGV)OR10H1 [DGVbeta]
DECIPHEROR10H1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR10H1 
Mutations
ICGC Data PortalOR10H1 
TCGA Data PortalOR10H1 
Broad Tumor PortalOR10H1
OASIS PortalOR10H1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR10H1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR10H1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR10H1
DgiDB (Drug Gene Interaction Database)OR10H1
DoCM (Curated mutations)OR10H1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR10H1 (select a term)
intoGenOR10H1
Cancer3DOR10H1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETOR10H1
MedgenOR10H1
Genetic Testing Registry OR10H1
NextProtQ9Y4A9 [Medical]
TSGene26539
GENETestsOR10H1
Target ValidationOR10H1
Huge Navigator OR10H1 [HugePedia]
snp3D : Map Gene to Disease26539
BioCentury BCIQOR10H1
ClinGenOR10H1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26539
Chemical/Pharm GKB GenePA31977
Clinical trialOR10H1
Miscellaneous
canSAR (ICR)OR10H1 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR10H1
EVEXOR10H1
GoPubMedOR10H1
iHOPOR10H1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:39:29 CET 2017

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