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OR10H2 (olfactory receptor family 10 subfamily H member 2)

Identity

Alias_namesolfactory receptor, family 10, subfamily H, member 2
Other alias-
HGNC (Hugo) OR10H2
LocusID (NCBI) 26538
Atlas_Id 71157
Location 19p13.12  [Link to chromosome band 19p13]
Location_base_pair Starts at 15728024 and ends at 15729052 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR10H2   8173
Cards
Entrez_Gene (NCBI)OR10H2  26538  olfactory receptor family 10 subfamily H member 2
Aliases
GeneCards (Weizmann)OR10H2
Ensembl hg19 (Hinxton)ENSG00000171942 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000171942 [Gene_View]  chr19:15728024-15729052 [Contig_View]  OR10H2 [Vega]
ICGC DataPortalENSG00000171942
TCGA cBioPortalOR10H2
AceView (NCBI)OR10H2
Genatlas (Paris)OR10H2
WikiGenes26538
SOURCE (Princeton)OR10H2
Genetics Home Reference (NIH)OR10H2
Genomic and cartography
GoldenPath hg38 (UCSC)OR10H2  -     chr19:15728024-15729052 +  19p13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR10H2  -     19p13.12   [Description]    (hg19-Feb_2009)
EnsemblOR10H2 - 19p13.12 [CytoView hg19]  OR10H2 - 19p13.12 [CytoView hg38]
Mapping of homologs : NCBIOR10H2 [Mapview hg19]  OR10H2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC069085 BC069457 BC112178 BC113647 HQ258140
RefSeq transcript (Entrez)NM_013939
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR10H2
Cluster EST : UnigeneHs.247694 [ NCBI ]
CGAP (NCI)Hs.247694
Alternative Splicing GalleryENSG00000171942
Gene ExpressionOR10H2 [ NCBI-GEO ]   OR10H2 [ EBI - ARRAY_EXPRESS ]   OR10H2 [ SEEK ]   OR10H2 [ MEM ]
Gene Expression Viewer (FireBrowse)OR10H2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26538
GTEX Portal (Tissue expression)OR10H2
Protein : pattern, domain, 3D structure
UniProt/SwissProtO60403   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO60403  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO60403
Splice isoforms : SwissVarO60403
PhosPhoSitePlusO60403
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR10H2
DMDM Disease mutations26538
Blocks (Seattle)OR10H2
SuperfamilyO60403
Human Protein AtlasENSG00000171942
Peptide AtlasO60403
HPRD17668
IPIIPI00029535   
Protein Interaction databases
DIP (DOE-UCLA)O60403
IntAct (EBI)O60403
FunCoupENSG00000171942
BioGRIDOR10H2
STRING (EMBL)OR10H2
ZODIACOR10H2
Ontologies - Pathways
QuickGOO60403
Ontology : AmiGOolfactory receptor activity  G-protein coupled serotonin receptor activity  plasma membrane  integral component of membrane  neurotransmitter receptor activity  detection of chemical stimulus involved in sensory perception of smell  G-protein coupled serotonin receptor signaling pathway  
Ontology : EGO-EBIolfactory receptor activity  G-protein coupled serotonin receptor activity  plasma membrane  integral component of membrane  neurotransmitter receptor activity  detection of chemical stimulus involved in sensory perception of smell  G-protein coupled serotonin receptor signaling pathway  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR10H2
Atlas of Cancer Signalling NetworkOR10H2
Wikipedia pathwaysOR10H2
Orthology - Evolution
OrthoDB26538
GeneTree (enSembl)ENSG00000171942
Phylogenetic Trees/Animal Genes : TreeFamOR10H2
HOVERGENO60403
HOGENOMO60403
Homologs : HomoloGeneOR10H2
Homology/Alignments : Family Browser (UCSC)OR10H2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR10H2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR10H2
dbVarOR10H2
ClinVarOR10H2
1000_GenomesOR10H2 
Exome Variant ServerOR10H2
ExAC (Exome Aggregation Consortium)OR10H2 (select the gene name)
Genetic variants : HAPMAP26538
Genomic Variants (DGV)OR10H2 [DGVbeta]
DECIPHEROR10H2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR10H2 
Mutations
ICGC Data PortalOR10H2 
TCGA Data PortalOR10H2 
Broad Tumor PortalOR10H2
OASIS PortalOR10H2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR10H2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR10H2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR10H2
DgiDB (Drug Gene Interaction Database)OR10H2
DoCM (Curated mutations)OR10H2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR10H2 (select a term)
intoGenOR10H2
Cancer3DOR10H2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR10H2
Genetic Testing Registry OR10H2
NextProtO60403 [Medical]
TSGene26538
GENETestsOR10H2
Target ValidationOR10H2
Huge Navigator OR10H2 [HugePedia]
snp3D : Map Gene to Disease26538
BioCentury BCIQOR10H2
ClinGenOR10H2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26538
Chemical/Pharm GKB GenePA31978
Clinical trialOR10H2
Miscellaneous
canSAR (ICR)OR10H2 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR10H2
EVEXOR10H2
GoPubMedOR10H2
iHOPOR10H2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:33:43 CEST 2017

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