Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

OR10H3 (olfactory receptor, family 10, subfamily H, member 3)

Identity

Alias_namesolfactory receptor, family 10, subfamily H, member 3
Other alias-
HGNC (Hugo) OR10H3
LocusID (NCBI) 26532
Atlas_Id 71158
Location 19p13.12  [Link to chromosome band 19p13]
Location_base_pair Starts at 15852203 and ends at 15853153 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR10H3   8174
Cards
Entrez_Gene (NCBI)OR10H3  26532  olfactory receptor, family 10, subfamily H, member 3
Aliases
GeneCards (Weizmann)OR10H3
Ensembl hg19 (Hinxton)ENSG00000171936 [Gene_View]  chr19:15852203-15853153 [Contig_View]  OR10H3 [Vega]
Ensembl hg38 (Hinxton)ENSG00000171936 [Gene_View]  chr19:15852203-15853153 [Contig_View]  OR10H3 [Vega]
ICGC DataPortalENSG00000171936
TCGA cBioPortalOR10H3
AceView (NCBI)OR10H3
Genatlas (Paris)OR10H3
WikiGenes26532
SOURCE (Princeton)OR10H3
Genetics Home Reference (NIH)OR10H3
Genomic and cartography
GoldenPath hg19 (UCSC)OR10H3  -     chr19:15852203-15853153 +  19p13.12   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)OR10H3  -     19p13.12   [Description]    (hg38-Dec_2013)
EnsemblOR10H3 - 19p13.12 [CytoView hg19]  OR10H3 - 19p13.12 [CytoView hg38]
Mapping of homologs : NCBIOR10H3 [Mapview hg19]  OR10H3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC106707 BC113844
RefSeq transcript (Entrez)NM_013938
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011295 NW_004929414
Consensus coding sequences : CCDS (NCBI)OR10H3
Cluster EST : UnigeneHs.553524 [ NCBI ]
CGAP (NCI)Hs.553524
Alternative Splicing GalleryENSG00000171936
Gene ExpressionOR10H3 [ NCBI-GEO ]   OR10H3 [ EBI - ARRAY_EXPRESS ]   OR10H3 [ SEEK ]   OR10H3 [ MEM ]
Gene Expression Viewer (FireBrowse)OR10H3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26532
GTEX Portal (Tissue expression)OR10H3
Protein : pattern, domain, 3D structure
UniProt/SwissProtO60404   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO60404  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO60404
Splice isoforms : SwissVarO60404
PhosPhoSitePlusO60404
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR10H3
DMDM Disease mutations26532
Blocks (Seattle)OR10H3
SuperfamilyO60404
Human Protein AtlasENSG00000171936
Peptide AtlasO60404
HPRD17669
IPIIPI00029538   
Protein Interaction databases
DIP (DOE-UCLA)O60404
IntAct (EBI)O60404
FunCoupENSG00000171936
BioGRIDOR10H3
STRING (EMBL)OR10H3
ZODIACOR10H3
Ontologies - Pathways
QuickGOO60404
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR10H3
Atlas of Cancer Signalling NetworkOR10H3
Wikipedia pathwaysOR10H3
Orthology - Evolution
OrthoDB26532
GeneTree (enSembl)ENSG00000171936
Phylogenetic Trees/Animal Genes : TreeFamOR10H3
HOVERGENO60404
HOGENOMO60404
Homologs : HomoloGeneOR10H3
Homology/Alignments : Family Browser (UCSC)OR10H3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR10H3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR10H3
dbVarOR10H3
ClinVarOR10H3
1000_GenomesOR10H3 
Exome Variant ServerOR10H3
ExAC (Exome Aggregation Consortium)OR10H3 (select the gene name)
Genetic variants : HAPMAP26532
Genomic Variants (DGV)OR10H3 [DGVbeta]
DECIPHER (Syndromes)19:15852203-15853153  ENSG00000171936
CONAN: Copy Number AnalysisOR10H3 
Mutations
ICGC Data PortalOR10H3 
TCGA Data PortalOR10H3 
Broad Tumor PortalOR10H3
OASIS PortalOR10H3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR10H3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR10H3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR10H3
DgiDB (Drug Gene Interaction Database)OR10H3
DoCM (Curated mutations)OR10H3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR10H3 (select a term)
intoGenOR10H3
Cancer3DOR10H3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR10H3
Genetic Testing Registry OR10H3
NextProtO60404 [Medical]
TSGene26532
GENETestsOR10H3
Huge Navigator OR10H3 [HugePedia]
snp3D : Map Gene to Disease26532
BioCentury BCIQOR10H3
ClinGenOR10H3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26532
Chemical/Pharm GKB GenePA31979
Clinical trialOR10H3
Miscellaneous
canSAR (ICR)OR10H3 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR10H3
EVEXOR10H3
GoPubMedOR10H3
iHOPOR10H3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:36:00 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.