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OR10H4 (olfactory receptor family 10 subfamily H member 4)

Identity

Alias_namesolfactory receptor, family 10, subfamily H, member 4
Other aliasOR19-28
HGNC (Hugo) OR10H4
LocusID (NCBI) 126541
Atlas_Id 71159
Location 19p13.12  [Link to chromosome band 19p13]
Location_base_pair Starts at 15949008 and ends at 15949958 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR10H4   15388
Cards
Entrez_Gene (NCBI)OR10H4  126541  olfactory receptor family 10 subfamily H member 4
AliasesOR19-28
GeneCards (Weizmann)OR10H4
Ensembl hg19 (Hinxton)ENSG00000176231 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000176231 [Gene_View]  chr19:15949008-15949958 [Contig_View]  OR10H4 [Vega]
ICGC DataPortalENSG00000176231
TCGA cBioPortalOR10H4
AceView (NCBI)OR10H4
Genatlas (Paris)OR10H4
WikiGenes126541
SOURCE (Princeton)OR10H4
Genetics Home Reference (NIH)OR10H4
Genomic and cartography
GoldenPath hg38 (UCSC)OR10H4  -     chr19:15949008-15949958 +  19p13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR10H4  -     19p13.12   [Description]    (hg19-Feb_2009)
EnsemblOR10H4 - 19p13.12 [CytoView hg19]  OR10H4 - 19p13.12 [CytoView hg38]
Mapping of homologs : NCBIOR10H4 [Mapview hg19]  OR10H4 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001004465
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR10H4
Cluster EST : UnigeneHs.553579 [ NCBI ]
CGAP (NCI)Hs.553579
Alternative Splicing GalleryENSG00000176231
Gene ExpressionOR10H4 [ NCBI-GEO ]   OR10H4 [ EBI - ARRAY_EXPRESS ]   OR10H4 [ SEEK ]   OR10H4 [ MEM ]
Gene Expression Viewer (FireBrowse)OR10H4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)126541
GTEX Portal (Tissue expression)OR10H4
Human Protein AtlasENSG00000176231-OR10H4 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGA5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGA5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGA5
Splice isoforms : SwissVarQ8NGA5
PhosPhoSitePlusQ8NGA5
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR10H4
DMDM Disease mutations126541
Blocks (Seattle)OR10H4
SuperfamilyQ8NGA5
Human Protein Atlas [tissue]ENSG00000176231-OR10H4 [tissue]
Peptide AtlasQ8NGA5
HPRD14891
IPIIPI00168963   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGA5
IntAct (EBI)Q8NGA5
FunCoupENSG00000176231
BioGRIDOR10H4
STRING (EMBL)OR10H4
ZODIACOR10H4
Ontologies - Pathways
QuickGOQ8NGA5
Ontology : AmiGOmolecular_function  olfactory receptor activity  G-protein coupled serotonin receptor activity  plasma membrane  biological_process  integral component of membrane  neurotransmitter receptor activity  detection of chemical stimulus involved in sensory perception of smell  G-protein coupled serotonin receptor signaling pathway  
Ontology : EGO-EBImolecular_function  olfactory receptor activity  G-protein coupled serotonin receptor activity  plasma membrane  biological_process  integral component of membrane  neurotransmitter receptor activity  detection of chemical stimulus involved in sensory perception of smell  G-protein coupled serotonin receptor signaling pathway  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR10H4
Atlas of Cancer Signalling NetworkOR10H4
Wikipedia pathwaysOR10H4
Orthology - Evolution
OrthoDB126541
GeneTree (enSembl)ENSG00000176231
Phylogenetic Trees/Animal Genes : TreeFamOR10H4
HOVERGENQ8NGA5
HOGENOMQ8NGA5
Homologs : HomoloGeneOR10H4
Homology/Alignments : Family Browser (UCSC)OR10H4
Gene fusions - Rearrangements
Fusion: Tumor Portal OR10H4
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR10H4 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR10H4
dbVarOR10H4
ClinVarOR10H4
1000_GenomesOR10H4 
Exome Variant ServerOR10H4
ExAC (Exome Aggregation Consortium)ENSG00000176231
GNOMAD BrowserENSG00000176231
Genetic variants : HAPMAP126541
Genomic Variants (DGV)OR10H4 [DGVbeta]
DECIPHEROR10H4 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR10H4 
Mutations
ICGC Data PortalOR10H4 
TCGA Data PortalOR10H4 
Broad Tumor PortalOR10H4
OASIS PortalOR10H4 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR10H4  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR10H4
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR10H4
DgiDB (Drug Gene Interaction Database)OR10H4
DoCM (Curated mutations)OR10H4 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR10H4 (select a term)
intoGenOR10H4
Cancer3DOR10H4(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR10H4
Genetic Testing Registry OR10H4
NextProtQ8NGA5 [Medical]
TSGene126541
GENETestsOR10H4
Target ValidationOR10H4
Huge Navigator OR10H4 [HugePedia]
snp3D : Map Gene to Disease126541
BioCentury BCIQOR10H4
ClinGenOR10H4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD126541
Chemical/Pharm GKB GenePA31980
Clinical trialOR10H4
Miscellaneous
canSAR (ICR)OR10H4 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR10H4
EVEXOR10H4
GoPubMedOR10H4
iHOPOR10H4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:19:59 CET 2017

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