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OR10J3 (olfactory receptor, family 10, subfamily J, member 3)

Identity

Alias_namesOR10J3P
olfactory receptor, family 10, subfamily J, member 3
Other aliasOR1-25
HGNC (Hugo) OR10J3
LocusID (NCBI) 441911
Atlas_Id 71162
Location 1q23.2  [Link to chromosome band 1q23]
Location_base_pair Starts at 159283460 and ends at 159284449 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR10J3   14992
Cards
Entrez_Gene (NCBI)OR10J3  441911  olfactory receptor, family 10, subfamily J, member 3
AliasesOR1-25; OR10J3P
GeneCards (Weizmann)OR10J3
Ensembl hg19 (Hinxton)ENSG00000196266 [Gene_View]  chr1:159283460-159284449 [Contig_View]  OR10J3 [Vega]
Ensembl hg38 (Hinxton)ENSG00000196266 [Gene_View]  chr1:159283460-159284449 [Contig_View]  OR10J3 [Vega]
ICGC DataPortalENSG00000196266
TCGA cBioPortalOR10J3
AceView (NCBI)OR10J3
Genatlas (Paris)OR10J3
WikiGenes441911
SOURCE (Princeton)OR10J3
Genetics Home Reference (NIH)OR10J3
Genomic and cartography
GoldenPath hg19 (UCSC)OR10J3  -     chr1:159283460-159284449 -  1q23.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)OR10J3  -     1q23.2   [Description]    (hg38-Dec_2013)
EnsemblOR10J3 - 1q23.2 [CytoView hg19]  OR10J3 - 1q23.2 [CytoView hg38]
Mapping of homologs : NCBIOR10J3 [Mapview hg19]  OR10J3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001004467
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_004487 NW_004929293
Consensus coding sequences : CCDS (NCBI)OR10J3
Cluster EST : UnigeneHs.553833 [ NCBI ]
CGAP (NCI)Hs.553833
Alternative Splicing GalleryENSG00000196266
Gene ExpressionOR10J3 [ NCBI-GEO ]   OR10J3 [ EBI - ARRAY_EXPRESS ]   OR10J3 [ SEEK ]   OR10J3 [ MEM ]
Gene Expression Viewer (FireBrowse)OR10J3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)441911
GTEX Portal (Tissue expression)OR10J3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5JRS4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5JRS4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5JRS4
Splice isoforms : SwissVarQ5JRS4
PhosPhoSitePlusQ5JRS4
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR10J3
DMDM Disease mutations441911
Blocks (Seattle)OR10J3
SuperfamilyQ5JRS4
Human Protein AtlasENSG00000196266
Peptide AtlasQ5JRS4
HPRD17672
IPIIPI00464960   
Protein Interaction databases
DIP (DOE-UCLA)Q5JRS4
IntAct (EBI)Q5JRS4
FunCoupENSG00000196266
BioGRIDOR10J3
STRING (EMBL)OR10J3
ZODIACOR10J3
Ontologies - Pathways
QuickGOQ5JRS4
Ontology : AmiGOtransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBItransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR10J3
Atlas of Cancer Signalling NetworkOR10J3
Wikipedia pathwaysOR10J3
Orthology - Evolution
OrthoDB441911
GeneTree (enSembl)ENSG00000196266
Phylogenetic Trees/Animal Genes : TreeFamOR10J3
HOVERGENQ5JRS4
HOGENOMQ5JRS4
Homologs : HomoloGeneOR10J3
Homology/Alignments : Family Browser (UCSC)OR10J3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR10J3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR10J3
dbVarOR10J3
ClinVarOR10J3
1000_GenomesOR10J3 
Exome Variant ServerOR10J3
ExAC (Exome Aggregation Consortium)OR10J3 (select the gene name)
Genetic variants : HAPMAP441911
Genomic Variants (DGV)OR10J3 [DGVbeta]
DECIPHER (Syndromes)1:159283460-159284449  ENSG00000196266
CONAN: Copy Number AnalysisOR10J3 
Mutations
ICGC Data PortalOR10J3 
TCGA Data PortalOR10J3 
Broad Tumor PortalOR10J3
OASIS PortalOR10J3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR10J3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR10J3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR10J3
DgiDB (Drug Gene Interaction Database)OR10J3
DoCM (Curated mutations)OR10J3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR10J3 (select a term)
intoGenOR10J3
Cancer3DOR10J3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR10J3
Genetic Testing Registry OR10J3
NextProtQ5JRS4 [Medical]
TSGene441911
GENETestsOR10J3
Huge Navigator OR10J3 [HugePedia]
snp3D : Map Gene to Disease441911
BioCentury BCIQOR10J3
ClinGenOR10J3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD441911
Chemical/Pharm GKB GenePA31984
Clinical trialOR10J3
Miscellaneous
canSAR (ICR)OR10J3 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR10J3
EVEXOR10J3
GoPubMedOR10J3
iHOPOR10J3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:36:01 CET 2017

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