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OR10J5 (olfactory receptor family 10 subfamily J member 5)

Identity

Alias_namesolfactory receptor, family 10, subfamily J, member 5
Other aliasOR1-28
HGNC (Hugo) OR10J5
LocusID (NCBI) 127385
Atlas_Id 71163
Location 1q23.2  [Link to chromosome band 1q23]
Location_base_pair Starts at 159535078 and ends at 159536007 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR10J5   14993
Cards
Entrez_Gene (NCBI)OR10J5  127385  olfactory receptor family 10 subfamily J member 5
AliasesOR1-28
GeneCards (Weizmann)OR10J5
Ensembl hg19 (Hinxton)ENSG00000184155 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000184155 [Gene_View]  chr1:159535078-159536007 [Contig_View]  OR10J5 [Vega]
ICGC DataPortalENSG00000184155
TCGA cBioPortalOR10J5
AceView (NCBI)OR10J5
Genatlas (Paris)OR10J5
WikiGenes127385
SOURCE (Princeton)OR10J5
Genetics Home Reference (NIH)OR10J5
Genomic and cartography
GoldenPath hg38 (UCSC)OR10J5  -     chr1:159535078-159536007 -  1q23.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR10J5  -     1q23.2   [Description]    (hg19-Feb_2009)
EnsemblOR10J5 - 1q23.2 [CytoView hg19]  OR10J5 - 1q23.2 [CytoView hg38]
Mapping of homologs : NCBIOR10J5 [Mapview hg19]  OR10J5 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC137025 BC137026
RefSeq transcript (Entrez)NM_001004469
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR10J5
Cluster EST : UnigeneHs.553587 [ NCBI ]
CGAP (NCI)Hs.553587
Alternative Splicing GalleryENSG00000184155
Gene ExpressionOR10J5 [ NCBI-GEO ]   OR10J5 [ EBI - ARRAY_EXPRESS ]   OR10J5 [ SEEK ]   OR10J5 [ MEM ]
Gene Expression Viewer (FireBrowse)OR10J5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)127385
GTEX Portal (Tissue expression)OR10J5
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NHC4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NHC4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NHC4
Splice isoforms : SwissVarQ8NHC4
PhosPhoSitePlusQ8NHC4
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR10J5
DMDM Disease mutations127385
Blocks (Seattle)OR10J5
SuperfamilyQ8NHC4
Human Protein AtlasENSG00000184155
Peptide AtlasQ8NHC4
HPRD14892
IPIIPI00303887   IPI00384214   
Protein Interaction databases
DIP (DOE-UCLA)Q8NHC4
IntAct (EBI)Q8NHC4
FunCoupENSG00000184155
BioGRIDOR10J5
STRING (EMBL)OR10J5
ZODIACOR10J5
Ontologies - Pathways
QuickGOQ8NHC4
Ontology : AmiGOolfactory receptor activity  G-protein coupled serotonin receptor activity  plasma membrane  integral component of membrane  neurotransmitter receptor activity  detection of chemical stimulus involved in sensory perception of smell  G-protein coupled serotonin receptor signaling pathway  
Ontology : EGO-EBIolfactory receptor activity  G-protein coupled serotonin receptor activity  plasma membrane  integral component of membrane  neurotransmitter receptor activity  detection of chemical stimulus involved in sensory perception of smell  G-protein coupled serotonin receptor signaling pathway  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR10J5
Atlas of Cancer Signalling NetworkOR10J5
Wikipedia pathwaysOR10J5
Orthology - Evolution
OrthoDB127385
GeneTree (enSembl)ENSG00000184155
Phylogenetic Trees/Animal Genes : TreeFamOR10J5
HOVERGENQ8NHC4
HOGENOMQ8NHC4
Homologs : HomoloGeneOR10J5
Homology/Alignments : Family Browser (UCSC)OR10J5
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR10J5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR10J5
dbVarOR10J5
ClinVarOR10J5
1000_GenomesOR10J5 
Exome Variant ServerOR10J5
ExAC (Exome Aggregation Consortium)OR10J5 (select the gene name)
Genetic variants : HAPMAP127385
Genomic Variants (DGV)OR10J5 [DGVbeta]
DECIPHEROR10J5 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR10J5 
Mutations
ICGC Data PortalOR10J5 
TCGA Data PortalOR10J5 
Broad Tumor PortalOR10J5
OASIS PortalOR10J5 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR10J5  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR10J5
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR10J5
DgiDB (Drug Gene Interaction Database)OR10J5
DoCM (Curated mutations)OR10J5 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR10J5 (select a term)
intoGenOR10J5
Cancer3DOR10J5(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR10J5
Genetic Testing Registry OR10J5
NextProtQ8NHC4 [Medical]
TSGene127385
GENETestsOR10J5
Target ValidationOR10J5
Huge Navigator OR10J5 [HugePedia]
snp3D : Map Gene to Disease127385
BioCentury BCIQOR10J5
ClinGenOR10J5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD127385
Chemical/Pharm GKB GenePA31986
Clinical trialOR10J5
Miscellaneous
canSAR (ICR)OR10J5 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR10J5
EVEXOR10J5
GoPubMedOR10J5
iHOPOR10J5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:32:45 CEST 2017

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