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OR10K1 (olfactory receptor family 10 subfamily K member 1)

Identity

Alias_namesolfactory receptor, family 10, subfamily K, member 1
Other aliasOR1-6
HGNC (Hugo) OR10K1
LocusID (NCBI) 391109
Atlas_Id 71164
Location 1q23.1  [Link to chromosome band 1q23]
Location_base_pair Starts at 158465562 and ends at 158466503 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR10K1   14693
Cards
Entrez_Gene (NCBI)OR10K1  391109  olfactory receptor family 10 subfamily K member 1
AliasesOR1-6
GeneCards (Weizmann)OR10K1
Ensembl hg19 (Hinxton)ENSG00000173285 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000173285 [Gene_View]  chr1:158465562-158466503 [Contig_View]  OR10K1 [Vega]
ICGC DataPortalENSG00000173285
TCGA cBioPortalOR10K1
AceView (NCBI)OR10K1
Genatlas (Paris)OR10K1
WikiGenes391109
SOURCE (Princeton)OR10K1
Genetics Home Reference (NIH)OR10K1
Genomic and cartography
GoldenPath hg38 (UCSC)OR10K1  -     chr1:158465562-158466503 +  1q23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR10K1  -     1q23.1   [Description]    (hg19-Feb_2009)
EnsemblOR10K1 - 1q23.1 [CytoView hg19]  OR10K1 - 1q23.1 [CytoView hg38]
Mapping of homologs : NCBIOR10K1 [Mapview hg19]  OR10K1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC137323 BC137324
RefSeq transcript (Entrez)NM_001004473
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR10K1
Cluster EST : UnigeneHs.690410 [ NCBI ]
CGAP (NCI)Hs.690410
Alternative Splicing GalleryENSG00000173285
Gene ExpressionOR10K1 [ NCBI-GEO ]   OR10K1 [ EBI - ARRAY_EXPRESS ]   OR10K1 [ SEEK ]   OR10K1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR10K1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)391109
GTEX Portal (Tissue expression)OR10K1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGX5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGX5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGX5
Splice isoforms : SwissVarQ8NGX5
PhosPhoSitePlusQ8NGX5
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR10K1
DMDM Disease mutations391109
Blocks (Seattle)OR10K1
SuperfamilyQ8NGX5
Human Protein AtlasENSG00000173285
Peptide AtlasQ8NGX5
HPRD14893
IPIIPI00169192   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGX5
IntAct (EBI)Q8NGX5
FunCoupENSG00000173285
BioGRIDOR10K1
STRING (EMBL)OR10K1
ZODIACOR10K1
Ontologies - Pathways
QuickGOQ8NGX5
Ontology : AmiGOtransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBItransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR10K1
Atlas of Cancer Signalling NetworkOR10K1
Wikipedia pathwaysOR10K1
Orthology - Evolution
OrthoDB391109
GeneTree (enSembl)ENSG00000173285
Phylogenetic Trees/Animal Genes : TreeFamOR10K1
HOVERGENQ8NGX5
HOGENOMQ8NGX5
Homologs : HomoloGeneOR10K1
Homology/Alignments : Family Browser (UCSC)OR10K1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR10K1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR10K1
dbVarOR10K1
ClinVarOR10K1
1000_GenomesOR10K1 
Exome Variant ServerOR10K1
ExAC (Exome Aggregation Consortium)OR10K1 (select the gene name)
Genetic variants : HAPMAP391109
Genomic Variants (DGV)OR10K1 [DGVbeta]
DECIPHEROR10K1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR10K1 
Mutations
ICGC Data PortalOR10K1 
TCGA Data PortalOR10K1 
Broad Tumor PortalOR10K1
OASIS PortalOR10K1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR10K1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR10K1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR10K1
DgiDB (Drug Gene Interaction Database)OR10K1
DoCM (Curated mutations)OR10K1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR10K1 (select a term)
intoGenOR10K1
Cancer3DOR10K1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR10K1
Genetic Testing Registry OR10K1
NextProtQ8NGX5 [Medical]
TSGene391109
GENETestsOR10K1
Target ValidationOR10K1
Huge Navigator OR10K1 [HugePedia]
snp3D : Map Gene to Disease391109
BioCentury BCIQOR10K1
ClinGenOR10K1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD391109
Chemical/Pharm GKB GenePA31988
Clinical trialOR10K1
Miscellaneous
canSAR (ICR)OR10K1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR10K1
EVEXOR10K1
GoPubMedOR10K1
iHOPOR10K1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:32:45 CEST 2017

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