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OR10Q1 (olfactory receptor family 10 subfamily Q member 1)

Identity

Alias_namesolfactory receptor, family 10, subfamily Q, member 1
Other aliasOR11-233
HGNC (Hugo) OR10Q1
LocusID (NCBI) 219960
Atlas_Id 71167
Location 11q12.1  [Link to chromosome band 11q12]
Location_base_pair Starts at 58227882 and ends at 58228918 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR10Q1   15134
Cards
Entrez_Gene (NCBI)OR10Q1  219960  olfactory receptor family 10 subfamily Q member 1
AliasesOR11-233
GeneCards (Weizmann)OR10Q1
Ensembl hg19 (Hinxton)ENSG00000180475 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000180475 [Gene_View]  chr11:58227882-58228918 [Contig_View]  OR10Q1 [Vega]
ICGC DataPortalENSG00000180475
TCGA cBioPortalOR10Q1
AceView (NCBI)OR10Q1
Genatlas (Paris)OR10Q1
WikiGenes219960
SOURCE (Princeton)OR10Q1
Genetics Home Reference (NIH)OR10Q1
Genomic and cartography
GoldenPath hg38 (UCSC)OR10Q1  -     chr11:58227882-58228918 -  11q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR10Q1  -     11q12.1   [Description]    (hg19-Feb_2009)
EnsemblOR10Q1 - 11q12.1 [CytoView hg19]  OR10Q1 - 11q12.1 [CytoView hg38]
Mapping of homologs : NCBIOR10Q1 [Mapview hg19]  OR10Q1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC140731
RefSeq transcript (Entrez)NM_001004471
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR10Q1
Cluster EST : UnigeneHs.553646 [ NCBI ]
CGAP (NCI)Hs.553646
Alternative Splicing GalleryENSG00000180475
Gene ExpressionOR10Q1 [ NCBI-GEO ]   OR10Q1 [ EBI - ARRAY_EXPRESS ]   OR10Q1 [ SEEK ]   OR10Q1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR10Q1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)219960
GTEX Portal (Tissue expression)OR10Q1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGQ4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGQ4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGQ4
Splice isoforms : SwissVarQ8NGQ4
PhosPhoSitePlusQ8NGQ4
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR10Q1
DMDM Disease mutations219960
Blocks (Seattle)OR10Q1
SuperfamilyQ8NGQ4
Human Protein AtlasENSG00000180475
Peptide AtlasQ8NGQ4
HPRD17673
IPIIPI00169085   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGQ4
IntAct (EBI)Q8NGQ4
FunCoupENSG00000180475
BioGRIDOR10Q1
STRING (EMBL)OR10Q1
ZODIACOR10Q1
Ontologies - Pathways
QuickGOQ8NGQ4
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR10Q1
Atlas of Cancer Signalling NetworkOR10Q1
Wikipedia pathwaysOR10Q1
Orthology - Evolution
OrthoDB219960
GeneTree (enSembl)ENSG00000180475
Phylogenetic Trees/Animal Genes : TreeFamOR10Q1
HOVERGENQ8NGQ4
HOGENOMQ8NGQ4
Homologs : HomoloGeneOR10Q1
Homology/Alignments : Family Browser (UCSC)OR10Q1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR10Q1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR10Q1
dbVarOR10Q1
ClinVarOR10Q1
1000_GenomesOR10Q1 
Exome Variant ServerOR10Q1
ExAC (Exome Aggregation Consortium)OR10Q1 (select the gene name)
Genetic variants : HAPMAP219960
Genomic Variants (DGV)OR10Q1 [DGVbeta]
DECIPHEROR10Q1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR10Q1 
Mutations
ICGC Data PortalOR10Q1 
TCGA Data PortalOR10Q1 
Broad Tumor PortalOR10Q1
OASIS PortalOR10Q1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR10Q1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR10Q1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR10Q1
DgiDB (Drug Gene Interaction Database)OR10Q1
DoCM (Curated mutations)OR10Q1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR10Q1 (select a term)
intoGenOR10Q1
Cancer3DOR10Q1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR10Q1
Genetic Testing Registry OR10Q1
NextProtQ8NGQ4 [Medical]
TSGene219960
GENETestsOR10Q1
Target ValidationOR10Q1
Huge Navigator OR10Q1 [HugePedia]
snp3D : Map Gene to Disease219960
BioCentury BCIQOR10Q1
ClinGenOR10Q1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD219960
Chemical/Pharm GKB GenePA31994
Clinical trialOR10Q1
Miscellaneous
canSAR (ICR)OR10Q1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR10Q1
EVEXOR10Q1
GoPubMedOR10Q1
iHOPOR10Q1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:33:45 CEST 2017

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