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OR10R2 (olfactory receptor family 10 subfamily R member 2)

Identity

Alias_namesolfactory receptor, family 10, subfamily R, member 2
Alias_symbol (synonym)OR10R2Q
Other aliasOR1-8
HGNC (Hugo) OR10R2
LocusID (NCBI) 343406
Atlas_Id 71168
Location 1q23.1  [Link to chromosome band 1q23]
Location_base_pair Starts at 158479878 and ends at 158480885 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR10R2   14820
Cards
Entrez_Gene (NCBI)OR10R2  343406  olfactory receptor family 10 subfamily R member 2
AliasesOR1-8; OR10R2Q
GeneCards (Weizmann)OR10R2
Ensembl hg19 (Hinxton)ENSG00000198965 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000198965 [Gene_View]  chr1:158479878-158480885 [Contig_View]  OR10R2 [Vega]
ICGC DataPortalENSG00000198965
TCGA cBioPortalOR10R2
AceView (NCBI)OR10R2
Genatlas (Paris)OR10R2
WikiGenes343406
SOURCE (Princeton)OR10R2
Genetics Home Reference (NIH)OR10R2
Genomic and cartography
GoldenPath hg38 (UCSC)OR10R2  -     chr1:158479878-158480885 +  1q23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR10R2  -     1q23.1   [Description]    (hg19-Feb_2009)
EnsemblOR10R2 - 1q23.1 [CytoView hg19]  OR10R2 - 1q23.1 [CytoView hg38]
Mapping of homologs : NCBIOR10R2 [Mapview hg19]  OR10R2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001004472
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR10R2
Cluster EST : UnigeneHs.451913 [ NCBI ]
CGAP (NCI)Hs.451913
Alternative Splicing GalleryENSG00000198965
Gene ExpressionOR10R2 [ NCBI-GEO ]   OR10R2 [ EBI - ARRAY_EXPRESS ]   OR10R2 [ SEEK ]   OR10R2 [ MEM ]
Gene Expression Viewer (FireBrowse)OR10R2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)343406
GTEX Portal (Tissue expression)OR10R2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGX6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGX6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGX6
Splice isoforms : SwissVarQ8NGX6
PhosPhoSitePlusQ8NGX6
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR10R2
DMDM Disease mutations343406
Blocks (Seattle)OR10R2
SuperfamilyQ8NGX6
Human Protein AtlasENSG00000198965
Peptide AtlasQ8NGX6
HPRD17674
IPIIPI00303717   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGX6
IntAct (EBI)Q8NGX6
FunCoupENSG00000198965
BioGRIDOR10R2
STRING (EMBL)OR10R2
ZODIACOR10R2
Ontologies - Pathways
QuickGOQ8NGX6
Ontology : AmiGOtransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBItransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR10R2
Atlas of Cancer Signalling NetworkOR10R2
Wikipedia pathwaysOR10R2
Orthology - Evolution
OrthoDB343406
GeneTree (enSembl)ENSG00000198965
Phylogenetic Trees/Animal Genes : TreeFamOR10R2
HOVERGENQ8NGX6
HOGENOMQ8NGX6
Homologs : HomoloGeneOR10R2
Homology/Alignments : Family Browser (UCSC)OR10R2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR10R2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR10R2
dbVarOR10R2
ClinVarOR10R2
1000_GenomesOR10R2 
Exome Variant ServerOR10R2
ExAC (Exome Aggregation Consortium)OR10R2 (select the gene name)
Genetic variants : HAPMAP343406
Genomic Variants (DGV)OR10R2 [DGVbeta]
DECIPHEROR10R2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR10R2 
Mutations
ICGC Data PortalOR10R2 
TCGA Data PortalOR10R2 
Broad Tumor PortalOR10R2
OASIS PortalOR10R2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR10R2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR10R2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR10R2
DgiDB (Drug Gene Interaction Database)OR10R2
DoCM (Curated mutations)OR10R2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR10R2 (select a term)
intoGenOR10R2
Cancer3DOR10R2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR10R2
Genetic Testing Registry OR10R2
NextProtQ8NGX6 [Medical]
TSGene343406
GENETestsOR10R2
Huge Navigator OR10R2 [HugePedia]
snp3D : Map Gene to Disease343406
BioCentury BCIQOR10R2
ClinGenOR10R2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD343406
Chemical/Pharm GKB GenePA31997
Clinical trialOR10R2
Miscellaneous
canSAR (ICR)OR10R2 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR10R2
EVEXOR10R2
GoPubMedOR10R2
iHOPOR10R2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 11:46:03 CEST 2017

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