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OR10V1 (olfactory receptor family 10 subfamily V member 1)

Identity

Alias_namesolfactory receptor, family 10, subfamily V, member 1
Other aliasOR11-256
HGNC (Hugo) OR10V1
LocusID (NCBI) 390201
Atlas_Id 71172
Location 11q12.1  [Link to chromosome band 11q12]
Location_base_pair Starts at 59712916 and ends at 59713845 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR10V1   15136
Cards
Entrez_Gene (NCBI)OR10V1  390201  olfactory receptor family 10 subfamily V member 1
AliasesOR11-256
GeneCards (Weizmann)OR10V1
Ensembl hg19 (Hinxton)ENSG00000172289 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000172289 [Gene_View]  chr11:59712916-59713845 [Contig_View]  OR10V1 [Vega]
ICGC DataPortalENSG00000172289
TCGA cBioPortalOR10V1
AceView (NCBI)OR10V1
Genatlas (Paris)OR10V1
WikiGenes390201
SOURCE (Princeton)OR10V1
Genetics Home Reference (NIH)OR10V1
Genomic and cartography
GoldenPath hg38 (UCSC)OR10V1  -     chr11:59712916-59713845 -  11q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR10V1  -     11q12.1   [Description]    (hg19-Feb_2009)
EnsemblOR10V1 - 11q12.1 [CytoView hg19]  OR10V1 - 11q12.1 [CytoView hg38]
Mapping of homologs : NCBIOR10V1 [Mapview hg19]  OR10V1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001005324
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR10V1
Cluster EST : UnigeneHs.589001 [ NCBI ]
CGAP (NCI)Hs.589001
Alternative Splicing GalleryENSG00000172289
Gene ExpressionOR10V1 [ NCBI-GEO ]   OR10V1 [ EBI - ARRAY_EXPRESS ]   OR10V1 [ SEEK ]   OR10V1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR10V1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)390201
GTEX Portal (Tissue expression)OR10V1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGI7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGI7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGI7
Splice isoforms : SwissVarQ8NGI7
PhosPhoSitePlusQ8NGI7
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR10V1
DMDM Disease mutations390201
Blocks (Seattle)OR10V1
SuperfamilyQ8NGI7
Human Protein AtlasENSG00000172289
Peptide AtlasQ8NGI7
HPRD17676
IPIIPI00169029   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGI7
IntAct (EBI)Q8NGI7
FunCoupENSG00000172289
BioGRIDOR10V1
STRING (EMBL)OR10V1
ZODIACOR10V1
Ontologies - Pathways
QuickGOQ8NGI7
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR10V1
Atlas of Cancer Signalling NetworkOR10V1
Wikipedia pathwaysOR10V1
Orthology - Evolution
OrthoDB390201
GeneTree (enSembl)ENSG00000172289
Phylogenetic Trees/Animal Genes : TreeFamOR10V1
HOVERGENQ8NGI7
HOGENOMQ8NGI7
Homologs : HomoloGeneOR10V1
Homology/Alignments : Family Browser (UCSC)OR10V1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR10V1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR10V1
dbVarOR10V1
ClinVarOR10V1
1000_GenomesOR10V1 
Exome Variant ServerOR10V1
ExAC (Exome Aggregation Consortium)OR10V1 (select the gene name)
Genetic variants : HAPMAP390201
Genomic Variants (DGV)OR10V1 [DGVbeta]
DECIPHEROR10V1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR10V1 
Mutations
ICGC Data PortalOR10V1 
TCGA Data PortalOR10V1 
Broad Tumor PortalOR10V1
OASIS PortalOR10V1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR10V1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR10V1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR10V1
DgiDB (Drug Gene Interaction Database)OR10V1
DoCM (Curated mutations)OR10V1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR10V1 (select a term)
intoGenOR10V1
Cancer3DOR10V1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR10V1
Genetic Testing Registry OR10V1
NextProtQ8NGI7 [Medical]
TSGene390201
GENETestsOR10V1
Target ValidationOR10V1
Huge Navigator OR10V1 [HugePedia]
snp3D : Map Gene to Disease390201
BioCentury BCIQOR10V1
ClinGenOR10V1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD390201
Chemical/Pharm GKB GenePA32003
Clinical trialOR10V1
Miscellaneous
canSAR (ICR)OR10V1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR10V1
EVEXOR10V1
GoPubMedOR10V1
iHOPOR10V1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:33:46 CEST 2017

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