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OR11A1 (olfactory receptor family 11 subfamily A member 1)

Identity

Alias_namesOR11A2
olfactory receptor, family 11, subfamily A, member 2
olfactory receptor, family 11, subfamily A, member 1
Alias_symbol (synonym)hs6M1-18
Other alias6M1-18
dJ994E9.6
HGNC (Hugo) OR11A1
LocusID (NCBI) 26531
Atlas_Id 71177
Location 6p22.1  [Link to chromosome band 6p22]
Location_base_pair Starts at 29425504 and ends at 29427732 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR11A1   8176
Cards
Entrez_Gene (NCBI)OR11A1  26531  olfactory receptor family 11 subfamily A member 1
Aliases6M1-18; OR11A2; dJ994E9.6; hs6M1-18
GeneCards (Weizmann)OR11A1
Ensembl hg19 (Hinxton)ENSG00000204694 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204694 [Gene_View]  ENSG00000204694 [Sequence]  chr6:29425504-29427732 [Contig_View]  OR11A1 [Vega]
ICGC DataPortalENSG00000204694
TCGA cBioPortalOR11A1
AceView (NCBI)OR11A1
Genatlas (Paris)OR11A1
WikiGenes26531
SOURCE (Princeton)OR11A1
Genetics Home Reference (NIH)OR11A1
Genomic and cartography
GoldenPath hg38 (UCSC)OR11A1  -     chr6:29425504-29427732 -  6p22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR11A1  -     6p22.1   [Description]    (hg19-Feb_2009)
EnsemblOR11A1 - 6p22.1 [CytoView hg19]  OR11A1 - 6p22.1 [CytoView hg38]
Mapping of homologs : NCBIOR11A1 [Mapview hg19]  OR11A1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AJ459854 AJ459855 AJ459857 BC131608
RefSeq transcript (Entrez)NM_013937
RefSeq genomic (Entrez)NC_000006 NC_018917 NG_034047 NT_113891 NT_167244 NT_167245 NT_167246 NT_167247 NT_167248 NT_167249
Consensus coding sequences : CCDS (NCBI)OR11A1
Cluster EST : UnigeneHs.676010 [ NCBI ]
CGAP (NCI)Hs.676010
Alternative Splicing GalleryENSG00000204694
Gene ExpressionOR11A1 [ NCBI-GEO ]   OR11A1 [ EBI - ARRAY_EXPRESS ]   OR11A1 [ SEEK ]   OR11A1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR11A1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26531
GTEX Portal (Tissue expression)OR11A1
Human Protein AtlasENSG00000204694-OR11A1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9GZK7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9GZK7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9GZK7
Splice isoforms : SwissVarQ9GZK7
PhosPhoSitePlusQ9GZK7
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR11A1
DMDM Disease mutations26531
Blocks (Seattle)OR11A1
SuperfamilyQ9GZK7
Human Protein Atlas [tissue]ENSG00000204694-OR11A1 [tissue]
Peptide AtlasQ9GZK7
HPRD14899
IPIIPI00026296   IPI00894293   
Protein Interaction databases
DIP (DOE-UCLA)Q9GZK7
IntAct (EBI)Q9GZK7
FunCoupENSG00000204694
BioGRIDOR11A1
STRING (EMBL)OR11A1
ZODIACOR11A1
Ontologies - Pathways
QuickGOQ9GZK7
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
NDEx NetworkOR11A1
Atlas of Cancer Signalling NetworkOR11A1
Wikipedia pathwaysOR11A1
Orthology - Evolution
OrthoDB26531
GeneTree (enSembl)ENSG00000204694
Phylogenetic Trees/Animal Genes : TreeFamOR11A1
HOVERGENQ9GZK7
HOGENOMQ9GZK7
Homologs : HomoloGeneOR11A1
Homology/Alignments : Family Browser (UCSC)OR11A1
Gene fusions - Rearrangements
Fusion : QuiverOR11A1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR11A1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR11A1
dbVarOR11A1
ClinVarOR11A1
1000_GenomesOR11A1 
Exome Variant ServerOR11A1
ExAC (Exome Aggregation Consortium)ENSG00000204694
GNOMAD BrowserENSG00000204694
Varsome BrowserOR11A1
Genetic variants : HAPMAP26531
Genomic Variants (DGV)OR11A1 [DGVbeta]
DECIPHEROR11A1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR11A1 
Mutations
ICGC Data PortalOR11A1 
TCGA Data PortalOR11A1 
Broad Tumor PortalOR11A1
OASIS PortalOR11A1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR11A1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR11A1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR11A1
DgiDB (Drug Gene Interaction Database)OR11A1
DoCM (Curated mutations)OR11A1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR11A1 (select a term)
intoGenOR11A1
Cancer3DOR11A1(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETOR11A1
MedgenOR11A1
Genetic Testing Registry OR11A1
NextProtQ9GZK7 [Medical]
TSGene26531
GENETestsOR11A1
Target ValidationOR11A1
Huge Navigator OR11A1 [HugePedia]
snp3D : Map Gene to Disease26531
BioCentury BCIQOR11A1
ClinGenOR11A1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26531
Chemical/Pharm GKB GenePA32010
Clinical trialOR11A1
Miscellaneous
canSAR (ICR)OR11A1 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR11A1
EVEXOR11A1
GoPubMedOR11A1
iHOPOR11A1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 14:21:11 CEST 2018

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