Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

OR11H2 (olfactory receptor family 11 subfamily H member 2)

Identity

Alias_namesOR11H2P
OR11H8P
C14orf15
olfactory receptor, family 11, subfamily H, member 8 pseudogene
olfactory receptor, family 11, subfamily H, member 2
Other aliasOR11H13
HGNC (Hugo) OR11H2
LocusID (NCBI) 79334
Atlas_Id 71181
Location 14q11.2  [Link to chromosome band 14q11]
Location_base_pair Starts at 19712904 and ends at 19714332 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR11H2   14716
Cards
Entrez_Gene (NCBI)OR11H2  79334  olfactory receptor family 11 subfamily H member 2
AliasesC14orf15; OR11H13; OR11H2P; OR11H8P
GeneCards (Weizmann)OR11H2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr14:19712904-19714332 [Contig_View]  OR11H2 [Vega]
TCGA cBioPortalOR11H2
AceView (NCBI)OR11H2
Genatlas (Paris)OR11H2
WikiGenes79334
SOURCE (Princeton)OR11H2
Genetics Home Reference (NIH)OR11H2
Genomic and cartography
GoldenPath hg38 (UCSC)OR11H2  -     chr14:19712904-19714332 -  14q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR11H2  -     14q11.2   [Description]    (hg19-Feb_2009)
EnsemblOR11H2 - 14q11.2 [CytoView hg19]  OR11H2 - 14q11.2 [CytoView hg38]
Mapping of homologs : NCBIOR11H2 [Mapview hg19]  OR11H2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001197287
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR11H2
Cluster EST : UnigeneHs.554706 [ NCBI ]
CGAP (NCI)Hs.554706
Gene ExpressionOR11H2 [ NCBI-GEO ]   OR11H2 [ EBI - ARRAY_EXPRESS ]   OR11H2 [ SEEK ]   OR11H2 [ MEM ]
Gene Expression Viewer (FireBrowse)OR11H2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79334
GTEX Portal (Tissue expression)OR11H2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NH07   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NH07  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NH07
Splice isoforms : SwissVarQ8NH07
PhosPhoSitePlusQ8NH07
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR11H2
DMDM Disease mutations79334
Blocks (Seattle)OR11H2
SuperfamilyQ8NH07
Peptide AtlasQ8NH07
IPIIPI00386359   
Protein Interaction databases
DIP (DOE-UCLA)Q8NH07
IntAct (EBI)Q8NH07
BioGRIDOR11H2
STRING (EMBL)OR11H2
ZODIACOR11H2
Ontologies - Pathways
QuickGOQ8NH07
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
NDEx NetworkOR11H2
Atlas of Cancer Signalling NetworkOR11H2
Wikipedia pathwaysOR11H2
Orthology - Evolution
OrthoDB79334
Phylogenetic Trees/Animal Genes : TreeFamOR11H2
HOVERGENQ8NH07
HOGENOMQ8NH07
Homologs : HomoloGeneOR11H2
Homology/Alignments : Family Browser (UCSC)OR11H2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR11H2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR11H2
dbVarOR11H2
ClinVarOR11H2
1000_GenomesOR11H2 
Exome Variant ServerOR11H2
ExAC (Exome Aggregation Consortium)OR11H2 (select the gene name)
Genetic variants : HAPMAP79334
Genomic Variants (DGV)OR11H2 [DGVbeta]
DECIPHEROR11H2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR11H2 
Mutations
ICGC Data PortalOR11H2 
TCGA Data PortalOR11H2 
Broad Tumor PortalOR11H2
OASIS PortalOR11H2 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDOR11H2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR11H2
DgiDB (Drug Gene Interaction Database)OR11H2
DoCM (Curated mutations)OR11H2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR11H2 (select a term)
intoGenOR11H2
Cancer3DOR11H2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR11H2
Genetic Testing Registry OR11H2
NextProtQ8NH07 [Medical]
TSGene79334
GENETestsOR11H2
Target ValidationOR11H2
Huge Navigator OR11H2 [HugePedia]
snp3D : Map Gene to Disease79334
BioCentury BCIQOR11H2
ClinGenOR11H2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79334
Chemical/Pharm GKB GenePA32014
Clinical trialOR11H2
Miscellaneous
canSAR (ICR)OR11H2 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR11H2
EVEXOR11H2
GoPubMedOR11H2
iHOPOR11H2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:33:48 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.