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OR11H4 (olfactory receptor, family 11, subfamily H, member 4)

Identity

Alias_namesolfactory receptor, family 11, subfamily H, member 4
Other aliasOR14-36
HGNC (Hugo) OR11H4
LocusID (NCBI) 390442
Atlas_Id 71182
Location 14q11.2  [Link to chromosome band 14q11]
Location_base_pair Starts at 20710951 and ends at 20711925 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR11H4   15347
Cards
Entrez_Gene (NCBI)OR11H4  390442  olfactory receptor, family 11, subfamily H, member 4
AliasesOR14-36
GeneCards (Weizmann)OR11H4
Ensembl hg19 (Hinxton)ENSG00000176198 [Gene_View]  chr14:20710951-20711925 [Contig_View]  OR11H4 [Vega]
Ensembl hg38 (Hinxton)ENSG00000176198 [Gene_View]  chr14:20710951-20711925 [Contig_View]  OR11H4 [Vega]
ICGC DataPortalENSG00000176198
TCGA cBioPortalOR11H4
AceView (NCBI)OR11H4
Genatlas (Paris)OR11H4
WikiGenes390442
SOURCE (Princeton)OR11H4
Genetics Home Reference (NIH)OR11H4
Genomic and cartography
GoldenPath hg19 (UCSC)OR11H4  -     chr14:20710951-20711925 +  14q11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)OR11H4  -     14q11.2   [Description]    (hg38-Dec_2013)
EnsemblOR11H4 - 14q11.2 [CytoView hg19]  OR11H4 - 14q11.2 [CytoView hg38]
Mapping of homologs : NCBIOR11H4 [Mapview hg19]  OR11H4 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC137054 BC137055
RefSeq transcript (Entrez)NM_001004479
RefSeq genomic (Entrez)NC_000014 NC_018925 NT_026437 NW_004929393
Consensus coding sequences : CCDS (NCBI)OR11H4
Cluster EST : UnigeneHs.553767 [ NCBI ]
CGAP (NCI)Hs.553767
Alternative Splicing GalleryENSG00000176198
Gene ExpressionOR11H4 [ NCBI-GEO ]   OR11H4 [ EBI - ARRAY_EXPRESS ]   OR11H4 [ SEEK ]   OR11H4 [ MEM ]
Gene Expression Viewer (FireBrowse)OR11H4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)390442
GTEX Portal (Tissue expression)OR11H4
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGC9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGC9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGC9
Splice isoforms : SwissVarQ8NGC9
PhosPhoSitePlusQ8NGC9
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR11H4
DMDM Disease mutations390442
Blocks (Seattle)OR11H4
SuperfamilyQ8NGC9
Human Protein AtlasENSG00000176198
Peptide AtlasQ8NGC9
HPRD14902
IPIIPI00168981   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGC9
IntAct (EBI)Q8NGC9
FunCoupENSG00000176198
BioGRIDOR11H4
STRING (EMBL)OR11H4
ZODIACOR11H4
Ontologies - Pathways
QuickGOQ8NGC9
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR11H4
Atlas of Cancer Signalling NetworkOR11H4
Wikipedia pathwaysOR11H4
Orthology - Evolution
OrthoDB390442
GeneTree (enSembl)ENSG00000176198
Phylogenetic Trees/Animal Genes : TreeFamOR11H4
HOVERGENQ8NGC9
HOGENOMQ8NGC9
Homologs : HomoloGeneOR11H4
Homology/Alignments : Family Browser (UCSC)OR11H4
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR11H4 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR11H4
dbVarOR11H4
ClinVarOR11H4
1000_GenomesOR11H4 
Exome Variant ServerOR11H4
ExAC (Exome Aggregation Consortium)OR11H4 (select the gene name)
Genetic variants : HAPMAP390442
Genomic Variants (DGV)OR11H4 [DGVbeta]
DECIPHER (Syndromes)14:20710951-20711925  ENSG00000176198
CONAN: Copy Number AnalysisOR11H4 
Mutations
ICGC Data PortalOR11H4 
TCGA Data PortalOR11H4 
Broad Tumor PortalOR11H4
OASIS PortalOR11H4 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR11H4  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR11H4
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR11H4
DgiDB (Drug Gene Interaction Database)OR11H4
DoCM (Curated mutations)OR11H4 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR11H4 (select a term)
intoGenOR11H4
Cancer3DOR11H4(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR11H4
Genetic Testing Registry OR11H4
NextProtQ8NGC9 [Medical]
TSGene390442
GENETestsOR11H4
Huge Navigator OR11H4 [HugePedia]
snp3D : Map Gene to Disease390442
BioCentury BCIQOR11H4
ClinGenOR11H4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD390442
Chemical/Pharm GKB GenePA32016
Clinical trialOR11H4
Miscellaneous
canSAR (ICR)OR11H4 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR11H4
EVEXOR11H4
GoPubMedOR11H4
iHOPOR11H4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:36:05 CET 2017

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