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OR11L1 (olfactory receptor, family 11, subfamily L, member 1)

Identity

Alias_namesolfactory receptor, family 11, subfamily L, member 1
Other alias-
HGNC (Hugo) OR11L1
LocusID (NCBI) 391189
Atlas_Id 71184
Location 1q44  [Link to chromosome band 1q44]
Location_base_pair Starts at 248004230 and ends at 248005198 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR11L1   14998
Cards
Entrez_Gene (NCBI)OR11L1  391189  olfactory receptor, family 11, subfamily L, member 1
Aliases
GeneCards (Weizmann)OR11L1
Ensembl hg19 (Hinxton)ENSG00000197591 [Gene_View]  chr1:248004230-248005198 [Contig_View]  OR11L1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000197591 [Gene_View]  chr1:248004230-248005198 [Contig_View]  OR11L1 [Vega]
ICGC DataPortalENSG00000197591
TCGA cBioPortalOR11L1
AceView (NCBI)OR11L1
Genatlas (Paris)OR11L1
WikiGenes391189
SOURCE (Princeton)OR11L1
Genetics Home Reference (NIH)OR11L1
Genomic and cartography
GoldenPath hg19 (UCSC)OR11L1  -     chr1:248004230-248005198 -  1q44   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)OR11L1  -     1q44   [Description]    (hg38-Dec_2013)
EnsemblOR11L1 - 1q44 [CytoView hg19]  OR11L1 - 1q44 [CytoView hg38]
Mapping of homologs : NCBIOR11L1 [Mapview hg19]  OR11L1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC140753
RefSeq transcript (Entrez)NM_001001959
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_167186 NW_004929294
Consensus coding sequences : CCDS (NCBI)OR11L1
Cluster EST : UnigeneHs.553781 [ NCBI ]
CGAP (NCI)Hs.553781
Alternative Splicing GalleryENSG00000197591
Gene ExpressionOR11L1 [ NCBI-GEO ]   OR11L1 [ EBI - ARRAY_EXPRESS ]   OR11L1 [ SEEK ]   OR11L1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR11L1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)391189
GTEX Portal (Tissue expression)OR11L1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGX0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGX0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGX0
Splice isoforms : SwissVarQ8NGX0
PhosPhoSitePlusQ8NGX0
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR11L1
DMDM Disease mutations391189
Blocks (Seattle)OR11L1
SuperfamilyQ8NGX0
Human Protein AtlasENSG00000197591
Peptide AtlasQ8NGX0
HPRD17677
IPIIPI00303705   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGX0
IntAct (EBI)Q8NGX0
FunCoupENSG00000197591
BioGRIDOR11L1
STRING (EMBL)OR11L1
ZODIACOR11L1
Ontologies - Pathways
QuickGOQ8NGX0
Ontology : AmiGOmolecular_function  G-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  integral component of plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  biological_process  detection of chemical stimulus involved in sensory perception of smell  detection of chemical stimulus involved in sensory perception of smell  extracellular exosome  
Ontology : EGO-EBImolecular_function  G-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  integral component of plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  biological_process  detection of chemical stimulus involved in sensory perception of smell  detection of chemical stimulus involved in sensory perception of smell  extracellular exosome  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR11L1
Atlas of Cancer Signalling NetworkOR11L1
Wikipedia pathwaysOR11L1
Orthology - Evolution
OrthoDB391189
GeneTree (enSembl)ENSG00000197591
Phylogenetic Trees/Animal Genes : TreeFamOR11L1
HOVERGENQ8NGX0
HOGENOMQ8NGX0
Homologs : HomoloGeneOR11L1
Homology/Alignments : Family Browser (UCSC)OR11L1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR11L1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR11L1
dbVarOR11L1
ClinVarOR11L1
1000_GenomesOR11L1 
Exome Variant ServerOR11L1
ExAC (Exome Aggregation Consortium)OR11L1 (select the gene name)
Genetic variants : HAPMAP391189
Genomic Variants (DGV)OR11L1 [DGVbeta]
DECIPHER (Syndromes)1:248004230-248005198  ENSG00000197591
CONAN: Copy Number AnalysisOR11L1 
Mutations
ICGC Data PortalOR11L1 
TCGA Data PortalOR11L1 
Broad Tumor PortalOR11L1
OASIS PortalOR11L1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR11L1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR11L1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR11L1
DgiDB (Drug Gene Interaction Database)OR11L1
DoCM (Curated mutations)OR11L1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR11L1 (select a term)
intoGenOR11L1
Cancer3DOR11L1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR11L1
Genetic Testing Registry OR11L1
NextProtQ8NGX0 [Medical]
TSGene391189
GENETestsOR11L1
Huge Navigator OR11L1 [HugePedia]
snp3D : Map Gene to Disease391189
BioCentury BCIQOR11L1
ClinGenOR11L1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD391189
Chemical/Pharm GKB GenePA32025
Clinical trialOR11L1
Miscellaneous
canSAR (ICR)OR11L1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR11L1
EVEXOR11L1
GoPubMedOR11L1
iHOPOR11L1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:36:05 CET 2017

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