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OR13G1 (olfactory receptor family 13 subfamily G member 1)

Identity

Alias_namesolfactory receptor, family 13, subfamily G, member 1
Other aliasOR1-37
HGNC (Hugo) OR13G1
LocusID (NCBI) 441933
Atlas_Id 71194
Location 1q44  [Link to chromosome band 1q44]
Location_base_pair Starts at 247672118 and ends at 247673041 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR13G1   14999
Cards
Entrez_Gene (NCBI)OR13G1  441933  olfactory receptor family 13 subfamily G member 1
AliasesOR1-37
GeneCards (Weizmann)OR13G1
Ensembl hg19 (Hinxton)ENSG00000197437 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000197437 [Gene_View]  chr1:247672118-247673041 [Contig_View]  OR13G1 [Vega]
ICGC DataPortalENSG00000197437
TCGA cBioPortalOR13G1
AceView (NCBI)OR13G1
Genatlas (Paris)OR13G1
WikiGenes441933
SOURCE (Princeton)OR13G1
Genetics Home Reference (NIH)OR13G1
Genomic and cartography
GoldenPath hg38 (UCSC)OR13G1  -     chr1:247672118-247673041 -  1q44   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR13G1  -     1q44   [Description]    (hg19-Feb_2009)
EnsemblOR13G1 - 1q44 [CytoView hg19]  OR13G1 - 1q44 [CytoView hg38]
Mapping of homologs : NCBIOR13G1 [Mapview hg19]  OR13G1 [Mapview hg38]
OMIM611677   
Gene and transcription
Genbank (Entrez)BC136736 BC136738
RefSeq transcript (Entrez)NM_001005487
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR13G1
Cluster EST : UnigeneHs.553834 [ NCBI ]
CGAP (NCI)Hs.553834
Alternative Splicing GalleryENSG00000197437
Gene ExpressionOR13G1 [ NCBI-GEO ]   OR13G1 [ EBI - ARRAY_EXPRESS ]   OR13G1 [ SEEK ]   OR13G1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR13G1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)441933
GTEX Portal (Tissue expression)OR13G1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGZ3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGZ3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGZ3
Splice isoforms : SwissVarQ8NGZ3
PhosPhoSitePlusQ8NGZ3
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR13G1
DMDM Disease mutations441933
Blocks (Seattle)OR13G1
SuperfamilyQ8NGZ3
Human Protein AtlasENSG00000197437
Peptide AtlasQ8NGZ3
HPRD17680
IPIIPI00386395   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGZ3
IntAct (EBI)Q8NGZ3
FunCoupENSG00000197437
BioGRIDOR13G1
STRING (EMBL)OR13G1
ZODIACOR13G1
Ontologies - Pathways
QuickGOQ8NGZ3
Ontology : AmiGOtransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBItransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR13G1
Atlas of Cancer Signalling NetworkOR13G1
Wikipedia pathwaysOR13G1
Orthology - Evolution
OrthoDB441933
GeneTree (enSembl)ENSG00000197437
Phylogenetic Trees/Animal Genes : TreeFamOR13G1
HOVERGENQ8NGZ3
HOGENOMQ8NGZ3
Homologs : HomoloGeneOR13G1
Homology/Alignments : Family Browser (UCSC)OR13G1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR13G1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR13G1
dbVarOR13G1
ClinVarOR13G1
1000_GenomesOR13G1 
Exome Variant ServerOR13G1
ExAC (Exome Aggregation Consortium)OR13G1 (select the gene name)
Genetic variants : HAPMAP441933
Genomic Variants (DGV)OR13G1 [DGVbeta]
DECIPHEROR13G1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR13G1 
Mutations
ICGC Data PortalOR13G1 
TCGA Data PortalOR13G1 
Broad Tumor PortalOR13G1
OASIS PortalOR13G1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR13G1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR13G1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR13G1
DgiDB (Drug Gene Interaction Database)OR13G1
DoCM (Curated mutations)OR13G1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR13G1 (select a term)
intoGenOR13G1
Cancer3DOR13G1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611677   
Orphanet
MedgenOR13G1
Genetic Testing Registry OR13G1
NextProtQ8NGZ3 [Medical]
TSGene441933
GENETestsOR13G1
Target ValidationOR13G1
Huge Navigator OR13G1 [HugePedia]
snp3D : Map Gene to Disease441933
BioCentury BCIQOR13G1
ClinGenOR13G1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD441933
Chemical/Pharm GKB GenePA32046
Clinical trialOR13G1
Miscellaneous
canSAR (ICR)OR13G1 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR13G1
EVEXOR13G1
GoPubMedOR13G1
iHOPOR13G1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:33:51 CEST 2017

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