Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

OR14I1 (olfactory receptor, family 14, subfamily I, member 1)

Identity

Alias_namesOR5BU1P
OR5BU1
olfactory receptor, family 5, subfamily BU, member 1
olfactory receptor, family 14, subfamily I, member 1
Other alias
HGNC (Hugo) OR14I1
LocusID (NCBI) 401994
Atlas_Id 71199
Location 1q44  [Link to chromosome band 1q44]
Location_base_pair Starts at 248844670 and ends at 248845605 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR14I1   19575
Cards
Entrez_Gene (NCBI)OR14I1  401994  olfactory receptor, family 14, subfamily I, member 1
AliasesOR5BU1; OR5BU1P
GeneCards (Weizmann)OR14I1
Ensembl hg19 (Hinxton)ENSG00000189181 [Gene_View]  chr1:248844670-248845605 [Contig_View]  OR14I1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000189181 [Gene_View]  chr1:248844670-248845605 [Contig_View]  OR14I1 [Vega]
ICGC DataPortalENSG00000189181
TCGA cBioPortalOR14I1
AceView (NCBI)OR14I1
Genatlas (Paris)OR14I1
WikiGenes401994
SOURCE (Princeton)OR14I1
Genetics Home Reference (NIH)OR14I1
Genomic and cartography
GoldenPath hg19 (UCSC)OR14I1  -     chr1:248844670-248845605 -  1q44   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)OR14I1  -     1q44   [Description]    (hg38-Dec_2013)
EnsemblOR14I1 - 1q44 [CytoView hg19]  OR14I1 - 1q44 [CytoView hg38]
Mapping of homologs : NCBIOR14I1 [Mapview hg19]  OR14I1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC137188 BC137189 HG493425
RefSeq transcript (Entrez)NM_001004734
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_167186 NW_004929294
Consensus coding sequences : CCDS (NCBI)OR14I1
Cluster EST : UnigeneHs.449973 [ NCBI ]
CGAP (NCI)Hs.449973
Alternative Splicing GalleryENSG00000189181
Gene ExpressionOR14I1 [ NCBI-GEO ]   OR14I1 [ EBI - ARRAY_EXPRESS ]   OR14I1 [ SEEK ]   OR14I1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR14I1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)401994
GTEX Portal (Tissue expression)OR14I1
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6ND48   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6ND48  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6ND48
Splice isoforms : SwissVarA6ND48
PhosPhoSitePlusA6ND48
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR14I1
DMDM Disease mutations401994
Blocks (Seattle)OR14I1
SuperfamilyA6ND48
Human Protein AtlasENSG00000189181
Peptide AtlasA6ND48
HPRD17755
IPIIPI00470370   
Protein Interaction databases
DIP (DOE-UCLA)A6ND48
IntAct (EBI)A6ND48
FunCoupENSG00000189181
BioGRIDOR14I1
STRING (EMBL)OR14I1
ZODIACOR14I1
Ontologies - Pathways
QuickGOA6ND48
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  integral component of plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  detection of chemical stimulus involved in sensory perception of smell  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  integral component of plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  detection of chemical stimulus involved in sensory perception of smell  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR14I1
Atlas of Cancer Signalling NetworkOR14I1
Wikipedia pathwaysOR14I1
Orthology - Evolution
OrthoDB401994
GeneTree (enSembl)ENSG00000189181
Phylogenetic Trees/Animal Genes : TreeFamOR14I1
HOVERGENA6ND48
HOGENOMA6ND48
Homologs : HomoloGeneOR14I1
Homology/Alignments : Family Browser (UCSC)OR14I1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR14I1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR14I1
dbVarOR14I1
ClinVarOR14I1
1000_GenomesOR14I1 
Exome Variant ServerOR14I1
ExAC (Exome Aggregation Consortium)OR14I1 (select the gene name)
Genetic variants : HAPMAP401994
Genomic Variants (DGV)OR14I1 [DGVbeta]
DECIPHER (Syndromes)1:248844670-248845605  ENSG00000189181
CONAN: Copy Number AnalysisOR14I1 
Mutations
ICGC Data PortalOR14I1 
TCGA Data PortalOR14I1 
Broad Tumor PortalOR14I1
OASIS PortalOR14I1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR14I1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR14I1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR14I1
DgiDB (Drug Gene Interaction Database)OR14I1
DoCM (Curated mutations)OR14I1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR14I1 (select a term)
intoGenOR14I1
Cancer3DOR14I1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR14I1
Genetic Testing Registry OR14I1
NextProtA6ND48 [Medical]
TSGene401994
GENETestsOR14I1
Huge Navigator OR14I1 [HugePedia]
snp3D : Map Gene to Disease401994
BioCentury BCIQOR14I1
ClinGenOR14I1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD401994
Chemical/Pharm GKB GenePA162398443
Clinical trialOR14I1
Miscellaneous
canSAR (ICR)OR14I1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR14I1
EVEXOR14I1
GoPubMedOR14I1
iHOPOR14I1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:36:09 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.