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OR14J1 (olfactory receptor family 14 subfamily J member 1)

Identity

Alias_namesOR5U1
olfactory receptor, family 5, subfamily U, member 1
olfactory receptor, family 14, subfamily J, member 1
Alias_symbol (synonym)hs6M1-28
Other aliasOR6-25
bA150A6.4
HGNC (Hugo) OR14J1
LocusID (NCBI) 442191
Atlas_Id 71200
Location 6p22.1  [Link to chromosome band 6p22]
Location_base_pair Starts at 29306690 and ends at 29307655 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR14J1   13971
Cards
Entrez_Gene (NCBI)OR14J1  442191  olfactory receptor family 14 subfamily J member 1
AliasesOR5U1; OR6-25; bA150A6.4; hs6M1-28
GeneCards (Weizmann)OR14J1
Ensembl hg19 (Hinxton)ENSG00000204695 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204695 [Gene_View]  ENSG00000204695 [Sequence]  chr6:29306690-29307655 [Contig_View]  OR14J1 [Vega]
ICGC DataPortalENSG00000204695
TCGA cBioPortalOR14J1
AceView (NCBI)OR14J1
Genatlas (Paris)OR14J1
WikiGenes442191
SOURCE (Princeton)OR14J1
Genetics Home Reference (NIH)OR14J1
Genomic and cartography
GoldenPath hg38 (UCSC)OR14J1  -     chr6:29306690-29307655 +  6p22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR14J1  -     6p22.1   [Description]    (hg19-Feb_2009)
EnsemblOR14J1 - 6p22.1 [CytoView hg19]  OR14J1 - 6p22.1 [CytoView hg38]
Mapping of homologs : NCBIOR14J1 [Mapview hg19]  OR14J1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC136905
RefSeq transcript (Entrez)NM_030946
RefSeq genomic (Entrez)NC_000006 NC_018917 NT_113891 NT_167244 NT_167245 NT_167246 NT_167247 NT_167249
Consensus coding sequences : CCDS (NCBI)OR14J1
Cluster EST : UnigeneHs.632004 [ NCBI ]
CGAP (NCI)Hs.632004
Alternative Splicing GalleryENSG00000204695
Gene ExpressionOR14J1 [ NCBI-GEO ]   OR14J1 [ EBI - ARRAY_EXPRESS ]   OR14J1 [ SEEK ]   OR14J1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR14J1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)442191
GTEX Portal (Tissue expression)OR14J1
Human Protein AtlasENSG00000204695-OR14J1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UGF5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UGF5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UGF5
Splice isoforms : SwissVarQ9UGF5
PhosPhoSitePlusQ9UGF5
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR14J1
DMDM Disease mutations442191
Blocks (Seattle)OR14J1
SuperfamilyQ9UGF5
Human Protein Atlas [tissue]ENSG00000204695-OR14J1 [tissue]
Peptide AtlasQ9UGF5
HPRD15053
IPIIPI00244663   
Protein Interaction databases
DIP (DOE-UCLA)Q9UGF5
IntAct (EBI)Q9UGF5
FunCoupENSG00000204695
BioGRIDOR14J1
STRING (EMBL)OR14J1
ZODIACOR14J1
Ontologies - Pathways
QuickGOQ9UGF5
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
NDEx NetworkOR14J1
Atlas of Cancer Signalling NetworkOR14J1
Wikipedia pathwaysOR14J1
Orthology - Evolution
OrthoDB442191
GeneTree (enSembl)ENSG00000204695
Phylogenetic Trees/Animal Genes : TreeFamOR14J1
HOVERGENQ9UGF5
HOGENOMQ9UGF5
Homologs : HomoloGeneOR14J1
Homology/Alignments : Family Browser (UCSC)OR14J1
Gene fusions - Rearrangements
Fusion : QuiverOR14J1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR14J1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR14J1
dbVarOR14J1
ClinVarOR14J1
1000_GenomesOR14J1 
Exome Variant ServerOR14J1
ExAC (Exome Aggregation Consortium)ENSG00000204695
GNOMAD BrowserENSG00000204695
Varsome BrowserOR14J1
Genetic variants : HAPMAP442191
Genomic Variants (DGV)OR14J1 [DGVbeta]
DECIPHEROR14J1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR14J1 
Mutations
ICGC Data PortalOR14J1 
TCGA Data PortalOR14J1 
Broad Tumor PortalOR14J1
OASIS PortalOR14J1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR14J1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR14J1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR14J1
DgiDB (Drug Gene Interaction Database)OR14J1
DoCM (Curated mutations)OR14J1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR14J1 (select a term)
intoGenOR14J1
Cancer3DOR14J1(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETOR14J1
MedgenOR14J1
Genetic Testing Registry OR14J1
NextProtQ9UGF5 [Medical]
TSGene442191
GENETestsOR14J1
Target ValidationOR14J1
Huge Navigator OR14J1 [HugePedia]
snp3D : Map Gene to Disease442191
BioCentury BCIQOR14J1
ClinGenOR14J1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD442191
Chemical/Pharm GKB GenePA162398444
Clinical trialOR14J1
Miscellaneous
canSAR (ICR)OR14J1 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR14J1
EVEXOR14J1
GoPubMedOR14J1
iHOPOR14J1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 14:21:17 CEST 2018

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