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OR1E1 (olfactory receptor family 1 subfamily E member 1)

Identity

Alias_namesOR1E9P
OR1E5
OR1E6
olfactory receptor, family 1, subfamily E, member 1
Alias_symbol (synonym)OR17-2
HGM071
OR17-32
OR13-66
Other aliasOR1E8P
OST547
HGNC (Hugo) OR1E1
LocusID (NCBI) 8387
Atlas_Id 71207
Location 17p13.3  [Link to chromosome band 17p13]
Location_base_pair Starts at 3397466 and ends at 3398410 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR1E1   8189
Cards
Entrez_Gene (NCBI)OR1E1  8387  olfactory receptor family 1 subfamily E member 1
AliasesHGM071; OR13-66; OR17-2; OR17-32; 
OR1E5; OR1E6; OR1E8P; OR1E9P; OST547
GeneCards (Weizmann)OR1E1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:3397466-3398410 [Contig_View]  OR1E1 [Vega]
TCGA cBioPortalOR1E1
AceView (NCBI)OR1E1
Genatlas (Paris)OR1E1
WikiGenes8387
SOURCE (Princeton)OR1E1
Genetics Home Reference (NIH)OR1E1
Genomic and cartography
GoldenPath hg38 (UCSC)OR1E1  -     chr17:3397466-3398410 -  17p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR1E1  -     17p13.3   [Description]    (hg19-Feb_2009)
EnsemblOR1E1 - 17p13.3 [CytoView hg19]  OR1E1 - 17p13.3 [CytoView hg38]
Mapping of homologs : NCBIOR1E1 [Mapview hg19]  OR1E1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC166630
RefSeq transcript (Entrez)NM_003553
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR1E1
Cluster EST : UnigeneHs.278485 [ NCBI ]
CGAP (NCI)Hs.278485
Gene ExpressionOR1E1 [ NCBI-GEO ]   OR1E1 [ EBI - ARRAY_EXPRESS ]   OR1E1 [ SEEK ]   OR1E1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR1E1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)8387
GTEX Portal (Tissue expression)OR1E1
Protein : pattern, domain, 3D structure
UniProt/SwissProtP30953   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP30953  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP30953
Splice isoforms : SwissVarP30953
PhosPhoSitePlusP30953
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR1E1
DMDM Disease mutations8387
Blocks (Seattle)OR1E1
SuperfamilyP30953
Peptide AtlasP30953
HPRD17685
IPIIPI00028117   
Protein Interaction databases
DIP (DOE-UCLA)P30953
IntAct (EBI)P30953
BioGRIDOR1E1
STRING (EMBL)OR1E1
ZODIACOR1E1
Ontologies - Pathways
QuickGOP30953
Ontology : AmiGOtransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBItransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR1E1
Atlas of Cancer Signalling NetworkOR1E1
Wikipedia pathwaysOR1E1
Orthology - Evolution
OrthoDB8387
Phylogenetic Trees/Animal Genes : TreeFamOR1E1
HOVERGENP30953
HOGENOMP30953
Homologs : HomoloGeneOR1E1
Homology/Alignments : Family Browser (UCSC)OR1E1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR1E1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR1E1
dbVarOR1E1
ClinVarOR1E1
1000_GenomesOR1E1 
Exome Variant ServerOR1E1
ExAC (Exome Aggregation Consortium)OR1E1 (select the gene name)
Genetic variants : HAPMAP8387
Genomic Variants (DGV)OR1E1 [DGVbeta]
DECIPHEROR1E1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR1E1 
Mutations
ICGC Data PortalOR1E1 
TCGA Data PortalOR1E1 
Broad Tumor PortalOR1E1
OASIS PortalOR1E1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR1E1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR1E1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR1E1
DgiDB (Drug Gene Interaction Database)OR1E1
DoCM (Curated mutations)OR1E1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR1E1 (select a term)
intoGenOR1E1
Cancer3DOR1E1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR1E1
Genetic Testing Registry OR1E1
NextProtP30953 [Medical]
TSGene8387
GENETestsOR1E1
Target ValidationOR1E1
Huge Navigator OR1E1 [HugePedia]
snp3D : Map Gene to Disease8387
BioCentury BCIQOR1E1
ClinGenOR1E1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD8387
Chemical/Pharm GKB GenePA32062
Clinical trialOR1E1
Miscellaneous
canSAR (ICR)OR1E1 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR1E1
EVEXOR1E1
GoPubMedOR1E1
iHOPOR1E1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:32:51 CEST 2017

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