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OR1E3 (olfactory receptor family 1 subfamily E member 3 (gene/pseudogene))

Identity

Alias_namesOR1E3P
olfactory receptor, family 1, subfamily E, member 3 pseudogene
olfactory receptor, family 1, subfamily E, member 3 (gene/pseudogene)
Alias_symbol (synonym)OR17-210
Other alias
HGNC (Hugo) OR1E3
LocusID (NCBI) 8389
Atlas_Id 79771
Location 17p13.3  [Link to chromosome band 17p13]
Location_base_pair Starts at 3116594 and ends at 3117457 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR1E3   8191
Cards
Entrez_Gene (NCBI)OR1E3  8389  olfactory receptor family 1 subfamily E member 3 (gene/pseudogene)
AliasesOR17-210; OR1E3P
GeneCards (Weizmann)OR1E3
Ensembl hg19 (Hinxton)ENSG00000142163 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000142163 [Gene_View]  chr17:3116594-3117457 [Contig_View]  OR1E3 [Vega]
ICGC DataPortalENSG00000142163
TCGA cBioPortalOR1E3
AceView (NCBI)OR1E3
Genatlas (Paris)OR1E3
WikiGenes8389
SOURCE (Princeton)OR1E3
Genetics Home Reference (NIH)OR1E3
Genomic and cartography
GoldenPath hg38 (UCSC)OR1E3  -     chr17:3116594-3117457 +  17p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR1E3  -     17p13.3   [Description]    (hg19-Feb_2009)
EnsemblOR1E3 - 17p13.3 [CytoView hg19]  OR1E3 - 17p13.3 [CytoView hg38]
Mapping of homologs : NCBIOR1E3 [Mapview hg19]  OR1E3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001348201
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR1E3
Alternative Splicing GalleryENSG00000142163
Gene ExpressionOR1E3 [ NCBI-GEO ]   OR1E3 [ EBI - ARRAY_EXPRESS ]   OR1E3 [ SEEK ]   OR1E3 [ MEM ]
Gene Expression Viewer (FireBrowse)OR1E3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)8389
GTEX Portal (Tissue expression)OR1E3
Protein : pattern, domain, 3D structure
UniPrmt/Swhs{ProtQ8WZA6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WZA6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WZA6
Splice isoforms : SwissVarQ8WZA6
PhosPhoSitePlusQ8WZA6
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR1E3
DMDM Disease mutations8389
Blocks (Seattle)OR1E3
SuperfamilyQ8WZA6
Human Protein AtlasENSG00000142163
Peptide AtlasQ8WZA6
IPIIPI00065371   IPI00883699   
Protein Interaction databases
DIP (DOE-UCLA)Q8WZA6
IntAct (EBI)Q8WZA6
FunCoupENSG00000142163
BioGRIDOR1E3
STRING (EMBL)OR1E3
ZODIACOR1E3
Ontologies - Pathways
QuickGOQ8WZA6
Ontology : AmiGOtransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBItransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chumicad 3timulus involved in sensory perception of smell  
NDEx NetworkOR1E3
Atlas of Cancer Signalling NetworkOR1E3
Wikipedia pathwaysOR1E3
Orthology - Evolution
OrthoDB8389
GeneTree (enSembl)ENSG00000142163
Phylogenetic Trees/Animal Genes : TreeFamOR1E3
HOVERGENQ8WZA6
HOGENOMQ8WZA6
Homologs : HomoloGeneOR1E3
Homology/Alignments : Family Browser (UCSC)OR1E3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR1E3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR1E3
dbVarOR1E3
ClinVarOR1E3
1000_GenomesOR1E3 
Exome Variant ServerOR1E3
ExAC (Exome Aggregation Consortium)OR1E3 (select the gene name)
Genetic variants : HAPMAP8389
Genomic Variants (DGV)OR1E3 [DGVbeta]
DECIPHEROR1E3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR1E3 
Mutations
ICGC Data PortalOR1E3 
TCGA Data PortalOR1E3 
Broad Tumor PortalOR1E3
OASIS PortalOR1E3 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDOR1E3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR1E3
DgiDB (Drug Gene Interaction Database)OR1E3
DoCM (Curated mutations)OR1E3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR1E3 (select a term)
intoGenOR1E3
Cancer3DOR1E3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR1E3
Genetic Testing Registry OR1E3
NextProtQ8WZA6 [Medical]
TSGene8389
GENETestsOR1E3
Target ValidationOR1E3
Huge Navigator OR1E3 [HugePedia]
snp3D : Map Gene to Disease8389
BioCentury BCIQOR1E3
ClinGenOR1E3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD8389
Chemical/Pharm GKB GenePA32064
Clinical trialOR1E3
Miscellaneous
canSAR (ICR)OR1E3 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR1E3
EVEXOR1E3
GoPubMedOR1E3
iHOPOR1E3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:32:52 CEST 2017

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