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OR1G1 (olfactory receptor family 1 subfamily G member 1)

Identity

Alias_namesOR1G2
olfactory receptor, family 1, subfamily G, member 1
Alias_symbol (synonym)OR17-209
Other aliasOR17-130
HGNC (Hugo) OR1G1
LocusID (NCBI) 8390
Atlas_Id 71211
Location 17p13.3  [Link to chromosome band 17p13]
Location_base_pair Starts at 3126610 and ends at 3127551 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR1G1   8204
Cards
Entrez_Gene (NCBI)OR1G1  8390  olfactory receptor family 1 subfamily G member 1
AliasesOR17-130; OR17-209; OR1G2
GeneCards (Weizmann)OR1G1
Ensembl hg19 (Hinxton)ENSG00000183024 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000183024 [Gene_View]  chr17:3126610-3127551 [Contig_View]  OR1G1 [Vega]
ICGC DataPortalENSG00000183024
TCGA cBioPortalOR1G1
AceView (NCBI)OR1G1
Genatlas (Paris)OR1G1
WikiGenes8390
SOURCE (Princeton)OR1G1
Genetics Home Reference (NIH)OR1G1
Genomic and cartography
GoldenPath hg38 (UCSC)OR1G1  -     chr17:3126610-3127551 -  17p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR1G1  -     17p13.3   [Description]    (hg19-Feb_2009)
EnsemblOR1G1 - 17p13.3 [CytoView hg19]  OR1G1 - 17p13.3 [CytoView hg38]
Mapping of homologs : NCBIOR1G1 [Mapview hg19]  OR1G1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC069379 BC095520
RefSeq transcript (Entrez)NM_003555
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR1G1
Cluster EST : UnigeneHs.248183 [ NCBI ]
CGAP (NCI)Hs.248183
Alternative Splicing GalleryENSG00000183024
Gene ExpressionOR1G1 [ NCBI-GEO ]   OR1G1 [ EBI - ARRAY_EXPRESS ]   OR1G1 [ SEEK ]   OR1G1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR1G1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)8390
GTEX Portal (Tissue expression)OR1G1
Protein : pattern, domain, 3D structure
UniProt/SwissProtP47890   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP47890  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP47890
Splice isoforms : SwissVarP47890
PhosPhoSitePlusP47890
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR1G1
DMDM Disease mutations8390
Blocks (Seattle)OR1G1
SuperfamilyP47890
Human Protein AtlasENSG00000183024
Peptide AtlasP47890
HPRD17687
IPIIPI00465268   
Protein Interaction databases
DIP (DOE-UCLA)P47890
IntAct (EBI)P47890
FunCoupENSG00000183024
BioGRIDOR1G1
STRING (EMBL)OR1G1
ZODIACOR1G1
Ontologies - Pathways
QuickGOP47890
Ontology : AmiGOtransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBItransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR1G1
Atlas of Cancer Signalling NetworkOR1G1
Wikipedia pathwaysOR1G1
Orthology - Evolution
OrthoDB8390
GeneTree (enSembl)ENSG00000183024
Phylogenetic Trees/Animal Genes : TreeFamOR1G1
HOVERGENP47890
HOGENOMP47890
Homologs : HomoloGeneOR1G1
Homology/Alignments : Family Browser (UCSC)OR1G1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR1G1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR1G1
dbVarOR1G1
ClinVarOR1G1
1000_GenomesOR1G1 
Exome Variant ServerOR1G1
ExAC (Exome Aggregation Consortium)OR1G1 (select the gene name)
Genetic variants : HAPMAP8390
Genomic Variants (DGV)OR1G1 [DGVbeta]
DECIPHEROR1G1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR1G1 
Mutations
ICGC Data PortalOR1G1 
TCGA Data PortalOR1G1 
Broad Tumor PortalOR1G1
OASIS PortalOR1G1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR1G1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR1G1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR1G1
DgiDB (Drug Gene Interaction Database)OR1G1
DoCM (Curated mutations)OR1G1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR1G1 (select a term)
intoGenOR1G1
Cancer3DOR1G1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR1G1
Genetic Testing Registry OR1G1
NextProtP47890 [Medical]
TSGene8390
GENETestsOR1G1
Target ValidationOR1G1
Huge Navigator OR1G1 [HugePedia]
snp3D : Map Gene to Disease8390
BioCentury BCIQOR1G1
ClinGenOR1G1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD8390
Chemical/Pharm GKB GenePA32076
Clinical trialOR1G1
Miscellaneous
canSAR (ICR)OR1G1 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR1G1
EVEXOR1G1
GoPubMedOR1G1
iHOPOR1G1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:32:52 CEST 2017

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