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OR1I1 (olfactory receptor family 1 subfamily I member 1)

Identity

Alias_namesolfactory receptor, family 1, subfamily I, member 1
Alias_symbol (synonym)OR1I1P
OR19-20
OR1I1Q
Other alias
HGNC (Hugo) OR1I1
LocusID (NCBI) 126370
Atlas_Id 71212
Location 19p13.12  [Link to chromosome band 19p13]
Location_base_pair Starts at 15087066 and ends at 15088133 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR1I1   8207
Cards
Entrez_Gene (NCBI)OR1I1  126370  olfactory receptor family 1 subfamily I member 1
AliasesOR19-20; OR1I1P; OR1I1Q
GeneCards (Weizmann)OR1I1
Ensembl hg19 (Hinxton)ENSG00000094661 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000094661 [Gene_View]  chr19:15087066-15088133 [Contig_View]  OR1I1 [Vega]
ICGC DataPortalENSG00000094661
TCGA cBioPortalOR1I1
AceView (NCBI)OR1I1
Genatlas (Paris)OR1I1
WikiGenes126370
SOURCE (Princeton)OR1I1
Genetics Home Reference (NIH)OR1I1
Genomic and cartography
GoldenPath hg38 (UCSC)OR1I1  -     chr19:15087066-15088133 +  19p13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR1I1  -     19p13.12   [Description]    (hg19-Feb_2009)
EnsemblOR1I1 - 19p13.12 [CytoView hg19]  OR1I1 - 19p13.12 [CytoView hg38]
Mapping of homologs : NCBIOR1I1 [Mapview hg19]  OR1I1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC140930
RefSeq transcript (Entrez)NM_001004713
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR1I1
Cluster EST : UnigeneHs.631610 [ NCBI ]
CGAP (NCI)Hs.631610
Alternative Splicing GalleryENSG00000094661
Gene ExpressionOR1I1 [ NCBI-GEO ]   OR1I1 [ EBI - ARRAY_EXPRESS ]   OR1I1 [ SEEK ]   OR1I1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR1I1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)126370
GTEX Portal (Tissue expression)OR1I1
Human Protein AtlasENSG00000094661-OR1I1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO60431   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO60431  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO60431
Splice isoforms : SwissVarO60431
PhosPhoSitePlusO60431
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR1I1
DMDM Disease mutations126370
Blocks (Seattle)OR1I1
SuperfamilyO60431
Human Protein Atlas [tissue]ENSG00000094661-OR1I1 [tissue]
Peptide AtlasO60431
HPRD14915
IPIIPI00029620   
Protein Interaction databases
DIP (DOE-UCLA)O60431
IntAct (EBI)O60431
FunCoupENSG00000094661
BioGRIDOR1I1
STRING (EMBL)OR1I1
ZODIACOR1I1
Ontologies - Pathways
QuickGOO60431
Ontology : AmiGOtransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBItransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR1I1
Atlas of Cancer Signalling NetworkOR1I1
Wikipedia pathwaysOR1I1
Orthology - Evolution
OrthoDB126370
GeneTree (enSembl)ENSG00000094661
Phylogenetic Trees/Animal Genes : TreeFamOR1I1
HOVERGENO60431
HOGENOMO60431
Homologs : HomoloGeneOR1I1
Homology/Alignments : Family Browser (UCSC)OR1I1
Gene fusions - Rearrangements
Tumor Fusion PortalOR1I1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR1I1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR1I1
dbVarOR1I1
ClinVarOR1I1
1000_GenomesOR1I1 
Exome Variant ServerOR1I1
ExAC (Exome Aggregation Consortium)ENSG00000094661
GNOMAD BrowserENSG00000094661
Genetic variants : HAPMAP126370
Genomic Variants (DGV)OR1I1 [DGVbeta]
DECIPHEROR1I1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR1I1 
Mutations
ICGC Data PortalOR1I1 
TCGA Data PortalOR1I1 
Broad Tumor PortalOR1I1
OASIS PortalOR1I1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR1I1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR1I1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR1I1
DgiDB (Drug Gene Interaction Database)OR1I1
DoCM (Curated mutations)OR1I1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR1I1 (select a term)
intoGenOR1I1
Cancer3DOR1I1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETOR1I1
MedgenOR1I1
Genetic Testing Registry OR1I1
NextProtO60431 [Medical]
TSGene126370
GENETestsOR1I1
Target ValidationOR1I1
Huge Navigator OR1I1 [HugePedia]
snp3D : Map Gene to Disease126370
BioCentury BCIQOR1I1
ClinGenOR1I1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD126370
Chemical/Pharm GKB GenePA32078
Clinical trialOR1I1
Miscellaneous
canSAR (ICR)OR1I1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR1I1
EVEXOR1I1
GoPubMedOR1I1
iHOPOR1I1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:39:30 CET 2017

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