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OR1Q1 (olfactory receptor family 1 subfamily Q member 1)

Identity

Alias_namesOR1Q2
OR1Q3
olfactory receptor, family 1, subfamily Q, member 1
Alias_symbol (synonym)OST226
OR9-A
HSTPCR106
OST226OR9-A
TPCR106
Other aliasOR9-25
HGNC (Hugo) OR1Q1
LocusID (NCBI) 158131
Atlas_Id 71225
Location 9q33.2  [Link to chromosome band 9q33]
Location_base_pair Starts at 122614738 and ends at 122615682 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR1Q1   8223
Cards
Entrez_Gene (NCBI)OR1Q1  158131  olfactory receptor family 1 subfamily Q member 1
AliasesHSTPCR106; OR1Q2; OR1Q3; OR9-25; 
OR9-A; OST226; OST226OR9-A; TPCR106
GeneCards (Weizmann)OR1Q1
Ensembl hg19 (Hinxton)ENSG00000165202 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000165202 [Gene_View]  chr9:122614738-122615682 [Contig_View]  OR1Q1 [Vega]
ICGC DataPortalENSG00000165202
TCGA cBioPortalOR1Q1
AceView (NCBI)OR1Q1
Genatlas (Paris)OR1Q1
WikiGenes158131
SOURCE (Princeton)OR1Q1
Genetics Home Reference (NIH)OR1Q1
Genomic and cartography
GoldenPath hg38 (UCSC)OR1Q1  -     chr9:122614738-122615682 +  9q33.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR1Q1  -     9q33.2   [Description]    (hg19-Feb_2009)
EnsemblOR1Q1 - 9q33.2 [CytoView hg19]  OR1Q1 - 9q33.2 [CytoView hg38]
Mapping of homologs : NCBIOR1Q1 [Mapview hg19]  OR1Q1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC140713 X89667
RefSeq transcript (Entrez)NM_012364
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR1Q1
Cluster EST : UnigeneHs.684864 [ NCBI ]
CGAP (NCI)Hs.684864
Alternative Splicing GalleryENSG00000165202
Gene ExpressionOR1Q1 [ NCBI-GEO ]   OR1Q1 [ EBI - ARRAY_EXPRESS ]   OR1Q1 [ SEEK ]   OR1Q1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR1Q1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)158131
GTEX Portal (Tissue expression)OR1Q1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ15612   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ15612  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ15612
Splice isoforms : SwissVarQ15612
PhosPhoSitePlusQ15612
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR1Q1
DMDM Disease mutations158131
Blocks (Seattle)OR1Q1
SuperfamilyQ15612
Human Protein AtlasENSG00000165202
Peptide AtlasQ15612
HPRD14926
IPIIPI00018693   
Protein Interaction databases
DIP (DOE-UCLA)Q15612
IntAct (EBI)Q15612
FunCoupENSG00000165202
BioGRIDOR1Q1
STRING (EMBL)OR1Q1
ZODIACOR1Q1
Ontologies - Pathways
QuickGOQ15612
Ontology : AmiGOtransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBItransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR1Q1
Atlas of Cancer Signalling NetworkOR1Q1
Wikipedia pathwaysOR1Q1
Orthology - Evolution
OrthoDB158131
GeneTree (enSembl)ENSG00000165202
Phylogenetic Trees/Animal Genes : TreeFamOR1Q1
HOVERGENQ15612
HOGENOMQ15612
Homologs : HomoloGeneOR1Q1
Homology/Alignments : Family Browser (UCSC)OR1Q1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR1Q1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR1Q1
dbVarOR1Q1
ClinVarOR1Q1
1000_GenomesOR1Q1 
Exome Variant ServerOR1Q1
ExAC (Exome Aggregation Consortium)OR1Q1 (select the gene name)
Genetic variants : HAPMAP158131
Genomic Variants (DGV)OR1Q1 [DGVbeta]
DECIPHEROR1Q1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR1Q1 
Mutations
ICGC Data PortalOR1Q1 
TCGA Data PortalOR1Q1 
Broad Tumor PortalOR1Q1
OASIS PortalOR1Q1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR1Q1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR1Q1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR1Q1
DgiDB (Drug Gene Interaction Database)OR1Q1
DoCM (Curated mutations)OR1Q1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR1Q1 (select a term)
intoGenOR1Q1
Cancer3DOR1Q1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR1Q1
Genetic Testing Registry OR1Q1
NextProtQ15612 [Medical]
TSGene158131
GENETestsOR1Q1
Target ValidationOR1Q1
Huge Navigator OR1Q1 [HugePedia]
snp3D : Map Gene to Disease158131
BioCentury BCIQOR1Q1
ClinGenOR1Q1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD158131
Chemical/Pharm GKB GenePA32094
Clinical trialOR1Q1
Miscellaneous
canSAR (ICR)OR1Q1 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR1Q1
EVEXOR1Q1
GoPubMedOR1Q1
iHOPOR1Q1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:32:54 CEST 2017

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