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OR2A2 (olfactory receptor family 2 subfamily A member 2)

Identity

Alias (NCBI)OR2A17P
OR2A2P
OR7-11
OST008
HGNC (Hugo) OR2A2
HGNC Alias symbOST008
HGNC Previous nameOR2A2P
 OR2A17P
HGNC Previous nameolfactory receptor, family 2, subfamily A, member 2
LocusID (NCBI) 442361
Atlas_Id 71232
Location 7q35  [Link to chromosome band 7q35]
Location_base_pair Starts at 144109583 and ends at 144110539 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)OR2A2   8230
Cards
Entrez_Gene (NCBI)OR2A2    olfactory receptor family 2 subfamily A member 2
AliasesOR2A17P; OR2A2P; OR7-11; OST008
GeneCards (Weizmann)OR2A2
Ensembl hg19 (Hinxton)ENSG00000221989 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000221989 [Gene_View]  ENSG00000221989 [Sequence]  chr7:144109583-144110539 [Contig_View]  OR2A2 [Vega]
ICGC DataPortalENSG00000221989
TCGA cBioPortalOR2A2
AceView (NCBI)OR2A2
Genatlas (Paris)OR2A2
SOURCE (Princeton)OR2A2
Genetics Home Reference (NIH)OR2A2
Genomic and cartography
GoldenPath hg38 (UCSC)OR2A2  -     chr7:144109583-144110539 +  7q35   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR2A2  -     7q35   [Description]    (hg19-Feb_2009)
GoldenPathOR2A2 - 7q35 [CytoView hg19]  OR2A2 - 7q35 [CytoView hg38]
ImmunoBaseENSG00000221989
Genome Data Viewer NCBIOR2A2 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BC136742
RefSeq transcript (Entrez)NM_001005480
Consensus coding sequences : CCDS (NCBI)OR2A2
Gene ExpressionOR2A2 [ NCBI-GEO ]   OR2A2 [ EBI - ARRAY_EXPRESS ]   OR2A2 [ SEEK ]   OR2A2 [ MEM ]
Gene Expression Viewer (FireBrowse)OR2A2 [ Firebrowse - Broad ]
GenevisibleExpression of OR2A2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)442361
GTEX Portal (Tissue expression)OR2A2
Human Protein AtlasENSG00000221989-OR2A2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6IF42   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6IF42  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6IF42
PhosPhoSitePlusQ6IF42
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt    OR2A2   
Domain families : Pfam (Sanger)7tm_4 (PF13853)   
Domain families : Pfam (NCBI)pfam13853   
Conserved Domain (NCBI)OR2A2
SuperfamilyQ6IF42
AlphaFold pdb e-kbQ6IF42   
Human Protein Atlas [tissue]ENSG00000221989-OR2A2 [tissue]
HPRD14931
Protein Interaction databases
DIP (DOE-UCLA)Q6IF42
IntAct (EBI)Q6IF42
BioGRIDOR2A2
STRING (EMBL)OR2A2
ZODIACOR2A2
Ontologies - Pathways
QuickGOQ6IF42
Ontology : AmiGOG protein-coupled receptor activity  olfactory receptor activity  plasma membrane  G protein-coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG protein-coupled receptor activity  olfactory receptor activity  plasma membrane  G protein-coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
NDEx NetworkOR2A2
Atlas of Cancer Signalling NetworkOR2A2
Wikipedia pathwaysOR2A2
Orthology - Evolution
OrthoDB442361
GeneTree (enSembl)ENSG00000221989
Phylogenetic Trees/Animal Genes : TreeFamOR2A2
Homologs : HomoloGeneOR2A2
Homology/Alignments : Family Browser (UCSC)OR2A2
Gene fusions - Rearrangements
Fusion : QuiverOR2A2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR2A2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR2A2
dbVarOR2A2
ClinVarOR2A2
MonarchOR2A2
1000_GenomesOR2A2 
Exome Variant ServerOR2A2
GNOMAD BrowserENSG00000221989
Varsome BrowserOR2A2
ACMGOR2A2 variants
VarityQ6IF42
Genomic Variants (DGV)OR2A2 [DGVbeta]
DECIPHEROR2A2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR2A2 
Mutations
ICGC Data PortalOR2A2 
TCGA Data PortalOR2A2 
Broad Tumor PortalOR2A2
OASIS PortalOR2A2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR2A2  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DOR2A2
Mutations and Diseases : HGMDOR2A2
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaOR2A2
DgiDB (Drug Gene Interaction Database)OR2A2
DoCM (Curated mutations)OR2A2
CIViC (Clinical Interpretations of Variants in Cancer)OR2A2
Cancer3DOR2A2
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETOR2A2
MedgenOR2A2
Genetic Testing Registry OR2A2
NextProtQ6IF42 [Medical]
GENETestsOR2A2
Target ValidationOR2A2
Huge Navigator OR2A2 [HugePedia]
ClinGenOR2A2
Clinical trials, drugs, therapy
MyCancerGenomeOR2A2
Protein Interactions : CTDOR2A2
Pharm GKB GenePA32115
PharosQ6IF42
Clinical trialOR2A2
Miscellaneous
canSAR (ICR)OR2A2
HarmonizomeOR2A2
DataMed IndexOR2A2
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXOR2A2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:14:00 CEST 2021

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