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OR2A2 (olfactory receptor family 2 subfamily A member 2)

Identity

Alias_namesOR2A2P
OR2A17P
olfactory receptor, family 2, subfamily A, member 2
Alias_symbol (synonym)OST008
Other aliasOR7-11
HGNC (Hugo) OR2A2
LocusID (NCBI) 442361
Atlas_Id 71232
Location 7q35  [Link to chromosome band 7q35]
Location_base_pair Starts at 144109583 and ends at 144110539 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR2A2   8230
Cards
Entrez_Gene (NCBI)OR2A2  442361  olfactory receptor family 2 subfamily A member 2
AliasesOR2A17P; OR2A2P; OR7-11; OST008
GeneCards (Weizmann)OR2A2
Ensembl hg19 (Hinxton)ENSG00000221989 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000221989 [Gene_View]  chr7:144109583-144110539 [Contig_View]  OR2A2 [Vega]
ICGC DataPortalENSG00000221989
TCGA cBioPortalOR2A2
AceView (NCBI)OR2A2
Genatlas (Paris)OR2A2
WikiGenes442361
SOURCE (Princeton)OR2A2
Genetics Home Reference (NIH)OR2A2
Genomic and cartography
GoldenPath hg38 (UCSC)OR2A2  -     chr7:144109583-144110539 +  7q35   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR2A2  -     7q35   [Description]    (hg19-Feb_2009)
EnsemblOR2A2 - 7q35 [CytoView hg19]  OR2A2 - 7q35 [CytoView hg38]
Mapping of homologs : NCBIOR2A2 [Mapview hg19]  OR2A2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC136742
RefSeq transcript (Entrez)NM_001005480
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR2A2
Cluster EST : UnigeneHs.553841 [ NCBI ]
CGAP (NCI)Hs.553841
Alternative Splicing GalleryENSG00000221989
Gene ExpressionOR2A2 [ NCBI-GEO ]   OR2A2 [ EBI - ARRAY_EXPRESS ]   OR2A2 [ SEEK ]   OR2A2 [ MEM ]
Gene Expression Viewer (FireBrowse)OR2A2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)442361
GTEX Portal (Tissue expression)OR2A2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6IF42   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6IF42  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6IF42
Splice isoforms : SwissVarQ6IF42
PhosPhoSitePlusQ6IF42
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt    OR2A2   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR2A2
DMDM Disease mutations442361
Blocks (Seattle)OR2A2
SuperfamilyQ6IF42
Human Protein AtlasENSG00000221989
Peptide AtlasQ6IF42
HPRD14931
IPIIPI00386374   IPI00377023   
Protein Interaction databases
DIP (DOE-UCLA)Q6IF42
IntAct (EBI)Q6IF42
FunCoupENSG00000221989
BioGRIDOR2A2
STRING (EMBL)OR2A2
ZODIACOR2A2
Ontologies - Pathways
QuickGOQ6IF42
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR2A2
Atlas of Cancer Signalling NetworkOR2A2
Wikipedia pathwaysOR2A2
Orthology - Evolution
OrthoDB442361
GeneTree (enSembl)ENSG00000221989
Phylogenetic Trees/Animal Genes : TreeFamOR2A2
HOVERGENQ6IF42
HOGENOMQ6IF42
Homologs : HomoloGeneOR2A2
Homology/Alignments : Family Browser (UCSC)OR2A2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR2A2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR2A2
dbVarOR2A2
ClinVarOR2A2
1000_GenomesOR2A2 
Exome Variant ServerOR2A2
ExAC (Exome Aggregation Consortium)OR2A2 (select the gene name)
Genetic variants : HAPMAP442361
Genomic Variants (DGV)OR2A2 [DGVbeta]
DECIPHEROR2A2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR2A2 
Mutations
ICGC Data PortalOR2A2 
TCGA Data PortalOR2A2 
Broad Tumor PortalOR2A2
OASIS PortalOR2A2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR2A2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR2A2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR2A2
DgiDB (Drug Gene Interaction Database)OR2A2
DoCM (Curated mutations)OR2A2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR2A2 (select a term)
intoGenOR2A2
Cancer3DOR2A2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR2A2
Genetic Testing Registry OR2A2
NextProtQ6IF42 [Medical]
TSGene442361
GENETestsOR2A2
Target ValidationOR2A2
Huge Navigator OR2A2 [HugePedia]
snp3D : Map Gene to Disease442361
BioCentury BCIQOR2A2
ClinGenOR2A2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD442361
Chemical/Pharm GKB GenePA32115
Clinical trialOR2A2
Miscellaneous
canSAR (ICR)OR2A2 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR2A2
EVEXOR2A2
GoPubMedOR2A2
iHOPOR2A2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:34:00 CEST 2017

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