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OR2A25 (olfactory receptor family 2 subfamily A member 25)

Identity

Alias (NCBI)OR2A24P
OR2A25P
OR2A27
HGNC (Hugo) OR2A25
HGNC Previous nameOR2A25P
 OR2A27
HGNC Previous nameolfactory receptor, family 2, subfamily A, member 25
LocusID (NCBI) 392138
Atlas_Id 71234
Location 7q35  [Link to chromosome band 7q35]
Location_base_pair Starts at 144074220 and ends at 144075152 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

 

Nomenclature
HGNC (Hugo)OR2A25   19562
Cards
Entrez_Gene (NCBI)OR2A25    olfactory receptor family 2 subfamily A member 25
AliasesOR2A24P; OR2A25P; OR2A27
GeneCards (Weizmann)OR2A25
Ensembl hg19 (Hinxton)ENSG00000221933 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000221933 [Gene_View]  ENSG00000221933 [Sequence]  chr7:144074220-144075152 [Contig_View]  OR2A25 [Vega]
ICGC DataPortalENSG00000221933
TCGA cBioPortalOR2A25
AceView (NCBI)OR2A25
Genatlas (Paris)OR2A25
SOURCE (Princeton)OR2A25
Genetics Home Reference (NIH)OR2A25
Genomic and cartography
GoldenPath hg38 (UCSC)OR2A25  -     chr7:144074220-144075152 +  7q35   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR2A25  -     7q35   [Description]    (hg19-Feb_2009)
GoldenPathOR2A25 - 7q35 [CytoView hg19]  OR2A25 - 7q35 [CytoView hg38]
ImmunoBaseENSG00000221933
Genome Data Viewer NCBIOR2A25 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BC136814 BC136829
RefSeq transcript (Entrez)NM_001004488 NM_001386096
Consensus coding sequences : CCDS (NCBI)OR2A25
Gene ExpressionOR2A25 [ NCBI-GEO ]   OR2A25 [ EBI - ARRAY_EXPRESS ]   OR2A25 [ SEEK ]   OR2A25 [ MEM ]
Gene Expression Viewer (FireBrowse)OR2A25 [ Firebrowse - Broad ]
GenevisibleExpression of OR2A25 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)392138
GTEX Portal (Tissue expression)OR2A25
Human Protein AtlasENSG00000221933-OR2A25 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtA4D2G3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA4D2G3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA4D2G3
PhosPhoSitePlusA4D2G3
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)7tm_4 (PF13853)   
Domain families : Pfam (NCBI)pfam13853   
Conserved Domain (NCBI)OR2A25
SuperfamilyA4D2G3
AlphaFold pdb e-kbA4D2G3   
Human Protein Atlas [tissue]ENSG00000221933-OR2A25 [tissue]
HPRD17691
Protein Interaction databases
DIP (DOE-UCLA)A4D2G3
IntAct (EBI)A4D2G3
BioGRIDOR2A25
STRING (EMBL)OR2A25
ZODIACOR2A25
Ontologies - Pathways
QuickGOA4D2G3
Ontology : AmiGOG protein-coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G protein-coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG protein-coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G protein-coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
NDEx NetworkOR2A25
Atlas of Cancer Signalling NetworkOR2A25
Wikipedia pathwaysOR2A25
Orthology - Evolution
OrthoDB392138
GeneTree (enSembl)ENSG00000221933
Phylogenetic Trees/Animal Genes : TreeFamOR2A25
Homologs : HomoloGeneOR2A25
Homology/Alignments : Family Browser (UCSC)OR2A25
Gene fusions - Rearrangements
Fusion : QuiverOR2A25
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR2A25 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR2A25
dbVarOR2A25
ClinVarOR2A25
MonarchOR2A25
1000_GenomesOR2A25 
Exome Variant ServerOR2A25
GNOMAD BrowserENSG00000221933
Varsome BrowserOR2A25
ACMGOR2A25 variants
VarityA4D2G3
Genomic Variants (DGV)OR2A25 [DGVbeta]
DECIPHEROR2A25 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR2A25 
Mutations
ICGC Data PortalOR2A25 
TCGA Data PortalOR2A25 
Broad Tumor PortalOR2A25
OASIS PortalOR2A25 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR2A25  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DOR2A25
Mutations and Diseases : HGMDOR2A25
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaOR2A25
DgiDB (Drug Gene Interaction Database)OR2A25
DoCM (Curated mutations)OR2A25
CIViC (Clinical Interpretations of Variants in Cancer)OR2A25
Cancer3DOR2A25
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETOR2A25
MedgenOR2A25
Genetic Testing Registry OR2A25
NextProtA4D2G3 [Medical]
GENETestsOR2A25
Target ValidationOR2A25
Huge Navigator OR2A25 [HugePedia]
ClinGenOR2A25
Clinical trials, drugs, therapy
MyCancerGenomeOR2A25
Protein Interactions : CTDOR2A25
Pharm GKB GenePA134892120
PharosA4D2G3
Clinical trialOR2A25
Miscellaneous
canSAR (ICR)OR2A25
HarmonizomeOR2A25
DataMed IndexOR2A25
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXOR2A25
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:14:00 CEST 2021
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