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OR2A5 (olfactory receptor family 2 subfamily A member 5)

Identity

Alias_namesOR2A8
OR2A26
olfactory receptor, family 2, subfamily A, member 5
Alias_symbol (synonym)OR7-138
OR7-141
Other aliasOR2A11P
HGNC (Hugo) OR2A5
LocusID (NCBI) 393046
Atlas_Id 71237
Location 7q35  [Link to chromosome band 7q35]
Location_base_pair Starts at 144050402 and ends at 144051337 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR2A5   8232
Cards
Entrez_Gene (NCBI)OR2A5  393046  olfactory receptor family 2 subfamily A member 5
AliasesOR2A11P; OR2A26; OR2A8; OR7-138; 
OR7-141
GeneCards (Weizmann)OR2A5
Ensembl hg19 (Hinxton)ENSG00000221836 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000221836 [Gene_View]  chr7:144050402-144051337 [Contig_View]  OR2A5 [Vega]
ICGC DataPortalENSG00000221836
TCGA cBioPortalOR2A5
AceView (NCBI)OR2A5
Genatlas (Paris)OR2A5
WikiGenes393046
SOURCE (Princeton)OR2A5
Genetics Home Reference (NIH)OR2A5
Genomic and cartography
GoldenPath hg38 (UCSC)OR2A5  -     chr7:144050402-144051337 +  7q35   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR2A5  -     7q35   [Description]    (hg19-Feb_2009)
EnsemblOR2A5 - 7q35 [CytoView hg19]  OR2A5 - 7q35 [CytoView hg38]
Mapping of homologs : NCBIOR2A5 [Mapview hg19]  OR2A5 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC136858 BC136860
RefSeq transcript (Entrez)NM_012365
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR2A5
Cluster EST : UnigeneHs.553793 [ NCBI ]
CGAP (NCI)Hs.553793
Alternative Splicing GalleryENSG00000221836
Gene ExpressionOR2A5 [ NCBI-GEO ]   OR2A5 [ EBI - ARRAY_EXPRESS ]   OR2A5 [ SEEK ]   OR2A5 [ MEM ]
Gene Expression Viewer (FireBrowse)OR2A5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)393046
GTEX Portal (Tissue expression)OR2A5
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96R48   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96R48  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96R48
Splice isoforms : SwissVarQ96R48
PhosPhoSitePlusQ96R48
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR2A5
DMDM Disease mutations393046
Blocks (Seattle)OR2A5
SuperfamilyQ96R48
Human Protein AtlasENSG00000221836
Peptide AtlasQ96R48
HPRD14932
IPIIPI00382685   IPI00914974   
Protein Interaction databases
DIP (DOE-UCLA)Q96R48
IntAct (EBI)Q96R48
FunCoupENSG00000221836
BioGRIDOR2A5
STRING (EMBL)OR2A5
ZODIACOR2A5
Ontologies - Pathways
QuickGOQ96R48
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR2A5
Atlas of Cancer Signalling NetworkOR2A5
Wikipedia pathwaysOR2A5
Orthology - Evolution
OrthoDB393046
GeneTree (enSembl)ENSG00000221836
Phylogenetic Trees/Animal Genes : TreeFamOR2A5
HOVERGENQ96R48
HOGENOMQ96R48
Homologs : HomoloGeneOR2A5
Homology/Alignments : Family Browser (UCSC)OR2A5
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR2A5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR2A5
dbVarOR2A5
ClinVarOR2A5
1000_GenomesOR2A5 
Exome Variant ServerOR2A5
ExAC (Exome Aggregation Consortium)OR2A5 (select the gene name)
Genetic variants : HAPMAP393046
Genomic Variants (DGV)OR2A5 [DGVbeta]
DECIPHEROR2A5 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR2A5 
Mutations
ICGC Data PortalOR2A5 
TCGA Data PortalOR2A5 
Broad Tumor PortalOR2A5
OASIS PortalOR2A5 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR2A5  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR2A5
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR2A5
DgiDB (Drug Gene Interaction Database)OR2A5
DoCM (Curated mutations)OR2A5 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR2A5 (select a term)
intoGenOR2A5
Cancer3DOR2A5(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR2A5
Genetic Testing Registry OR2A5
NextProtQ96R48 [Medical]
TSGene393046
GENETestsOR2A5
Target ValidationOR2A5
Huge Navigator OR2A5 [HugePedia]
snp3D : Map Gene to Disease393046
BioCentury BCIQOR2A5
ClinGenOR2A5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD393046
Chemical/Pharm GKB GenePA32118
Clinical trialOR2A5
Miscellaneous
canSAR (ICR)OR2A5 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR2A5
EVEXOR2A5
GoPubMedOR2A5
iHOPOR2A5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:34:01 CEST 2017

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