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OR2A7 (olfactory receptor family 2 subfamily A member 7)

Identity

Alias_namesolfactory receptor, family 2, subfamily A, member 7
Alias_symbol (synonym)HSDJ0798C17
Other aliasOR2A21
HGNC (Hugo) OR2A7
LocusID (NCBI) 401427
Atlas_Id 71238
Location 7q35  [Link to chromosome band 7q35]
Location_base_pair Starts at 144258696 and ends at 144259628 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR2A7   8234
Cards
Entrez_Gene (NCBI)OR2A7  401427  olfactory receptor family 2 subfamily A member 7
AliasesHSDJ0798C17; OR2A21
GeneCards (Weizmann)OR2A7
Ensembl hg19 (Hinxton)ENSG00000243896 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000243896 [Gene_View]  chr7:144258696-144259628 [Contig_View]  OR2A7 [Vega]
ICGC DataPortalENSG00000243896
TCGA cBioPortalOR2A7
AceView (NCBI)OR2A7
Genatlas (Paris)OR2A7
WikiGenes401427
SOURCE (Princeton)OR2A7
Genetics Home Reference (NIH)OR2A7
Genomic and cartography
GoldenPath hg38 (UCSC)OR2A7  -     chr7:144258696-144259628 -  7q35   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR2A7  -     7q35   [Description]    (hg19-Feb_2009)
EnsemblOR2A7 - 7q35 [CytoView hg19]  OR2A7 - 7q35 [CytoView hg38]
Mapping of homologs : NCBIOR2A7 [Mapview hg19]  OR2A7 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF327904 BC136704 BC136711
RefSeq transcript (Entrez)NM_001005328
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR2A7
Cluster EST : UnigeneHs.745042 [ NCBI ]
CGAP (NCI)Hs.745042
Alternative Splicing GalleryENSG00000243896
Gene ExpressionOR2A7 [ NCBI-GEO ]   OR2A7 [ EBI - ARRAY_EXPRESS ]   OR2A7 [ SEEK ]   OR2A7 [ MEM ]
Gene Expression Viewer (FireBrowse)OR2A7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)401427
GTEX Portal (Tissue expression)OR2A7
Human Protein AtlasENSG00000243896-OR2A7 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96R45   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96R45  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96R45
Splice isoforms : SwissVarQ96R45
PhosPhoSitePlusQ96R45
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR2A7
DMDM Disease mutations401427
Blocks (Seattle)OR2A7
SuperfamilyQ96R45
Human Protein Atlas [tissue]ENSG00000243896-OR2A7 [tissue]
Peptide AtlasQ96R45
HPRD14933
IPIIPI00374072   
Protein Interaction databases
DIP (DOE-UCLA)Q96R45
IntAct (EBI)Q96R45
FunCoupENSG00000243896
BioGRIDOR2A7
STRING (EMBL)OR2A7
ZODIACOR2A7
Ontologies - Pathways
QuickGOQ96R45
Ontology : AmiGOtransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBItransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR2A7
Atlas of Cancer Signalling NetworkOR2A7
Wikipedia pathwaysOR2A7
Orthology - Evolution
OrthoDB401427
GeneTree (enSembl)ENSG00000243896
Phylogenetic Trees/Animal Genes : TreeFamOR2A7
HOVERGENQ96R45
HOGENOMQ96R45
Homologs : HomoloGeneOR2A7
Homology/Alignments : Family Browser (UCSC)OR2A7
Gene fusions - Rearrangements
Tumor Fusion PortalOR2A7
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR2A7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR2A7
dbVarOR2A7
ClinVarOR2A7
1000_GenomesOR2A7 
Exome Variant ServerOR2A7
ExAC (Exome Aggregation Consortium)ENSG00000243896
GNOMAD BrowserENSG00000243896
Genetic variants : HAPMAP401427
Genomic Variants (DGV)OR2A7 [DGVbeta]
DECIPHEROR2A7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR2A7 
Mutations
ICGC Data PortalOR2A7 
TCGA Data PortalOR2A7 
Broad Tumor PortalOR2A7
OASIS PortalOR2A7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR2A7  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR2A7
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR2A7
DgiDB (Drug Gene Interaction Database)OR2A7
DoCM (Curated mutations)OR2A7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR2A7 (select a term)
intoGenOR2A7
Cancer3DOR2A7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETOR2A7
MedgenOR2A7
Genetic Testing Registry OR2A7
NextProtQ96R45 [Medical]
TSGene401427
GENETestsOR2A7
Target ValidationOR2A7
Huge Navigator OR2A7 [HugePedia]
snp3D : Map Gene to Disease401427
BioCentury BCIQOR2A7
ClinGenOR2A7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD401427
Chemical/Pharm GKB GenePA32120
Clinical trialOR2A7
Miscellaneous
canSAR (ICR)OR2A7 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR2A7
EVEXOR2A7
GoPubMedOR2A7
iHOPOR2A7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Nov 20 20:04:39 CET 2017

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