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OR2AE1 (olfactory receptor family 2 subfamily AE member 1)

Identity

Alias_namesOR2AE2
olfactory receptor, family 2, subfamily AE, member 2
olfactory receptor, family 2, subfamily AE, member 1
Other alias
HGNC (Hugo) OR2AE1
LocusID (NCBI) 81392
Atlas_Id 71240
Location 7q22.1  [Link to chromosome band 7q22]
Location_base_pair Starts at 99876062 and ends at 99877033 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR2AE1   15087
Cards
Entrez_Gene (NCBI)OR2AE1  81392  olfactory receptor family 2 subfamily AE member 1
AliasesOR2AE2
GeneCards (Weizmann)OR2AE1
Ensembl hg19 (Hinxton)ENSG00000244623 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000244623 [Gene_View]  chr7:99876062-99877033 [Contig_View]  OR2AE1 [Vega]
ICGC DataPortalENSG00000244623
TCGA cBioPortalOR2AE1
AceView (NCBI)OR2AE1
Genatlas (Paris)OR2AE1
WikiGenes81392
SOURCE (Princeton)OR2AE1
Genetics Home Reference (NIH)OR2AE1
Genomic and cartography
GoldenPath hg38 (UCSC)OR2AE1  -     chr7:99876062-99877033 -  7q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR2AE1  -     7q22.1   [Description]    (hg19-Feb_2009)
EnsemblOR2AE1 - 7q22.1 [CytoView hg19]  OR2AE1 - 7q22.1 [CytoView hg38]
Mapping of homologs : NCBIOR2AE1 [Mapview hg19]  OR2AE1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC137375 BC137376
RefSeq transcript (Entrez)NM_001005276
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR2AE1
Cluster EST : UnigeneHs.647523 [ NCBI ]
CGAP (NCI)Hs.647523
Alternative Splicing GalleryENSG00000244623
Gene ExpressionOR2AE1 [ NCBI-GEO ]   OR2AE1 [ EBI - ARRAY_EXPRESS ]   OR2AE1 [ SEEK ]   OR2AE1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR2AE1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)81392
GTEX Portal (Tissue expression)OR2AE1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NHA4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NHA4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NHA4
Splice isoforms : SwissVarQ8NHA4
PhosPhoSitePlusQ8NHA4
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR2AE1
DMDM Disease mutations81392
Blocks (Seattle)OR2AE1
SuperfamilyQ8NHA4
Human Protein AtlasENSG00000244623
Peptide AtlasQ8NHA4
HPRD14934
IPIIPI00375225   
Protein Interaction databases
DIP (DOE-UCLA)Q8NHA4
IntAct (EBI)Q8NHA4
FunCoupENSG00000244623
BioGRIDOR2AE1
STRING (EMBL)OR2AE1
ZODIACOR2AE1
Ontologies - Pathways
QuickGOQ8NHA4
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR2AE1
Atlas of Cancer Signalling NetworkOR2AE1
Wikipedia pathwaysOR2AE1
Orthology - Evolution
OrthoDB81392
GeneTree (enSembl)ENSG00000244623
Phylogenetic Trees/Animal Genes : TreeFamOR2AE1
HOVERGENQ8NHA4
HOGENOMQ8NHA4
Homologs : HomoloGeneOR2AE1
Homology/Alignments : Family Browser (UCSC)OR2AE1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR2AE1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR2AE1
dbVarOR2AE1
ClinVarOR2AE1
1000_GenomesOR2AE1 
Exome Variant ServerOR2AE1
ExAC (Exome Aggregation Consortium)OR2AE1 (select the gene name)
Genetic variants : HAPMAP81392
Genomic Variants (DGV)OR2AE1 [DGVbeta]
DECIPHEROR2AE1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR2AE1 
Mutations
ICGC Data PortalOR2AE1 
TCGA Data PortalOR2AE1 
Broad Tumor PortalOR2AE1
OASIS PortalOR2AE1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR2AE1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR2AE1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR2AE1
DgiDB (Drug Gene Interaction Database)OR2AE1
DoCM (Curated mutations)OR2AE1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR2AE1 (select a term)
intoGenOR2AE1
Cancer3DOR2AE1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR2AE1
Genetic Testing Registry OR2AE1
NextProtQ8NHA4 [Medical]
TSGene81392
GENETestsOR2AE1
Target ValidationOR2AE1
Huge Navigator OR2AE1 [HugePedia]
snp3D : Map Gene to Disease81392
BioCentury BCIQOR2AE1
ClinGenOR2AE1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD81392
Chemical/Pharm GKB GenePA32123
Clinical trialOR2AE1
Miscellaneous
canSAR (ICR)OR2AE1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR2AE1
EVEXOR2AE1
GoPubMedOR2AE1
iHOPOR2AE1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:34:02 CEST 2017

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