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OR2AG1 (olfactory receptor family 2 subfamily AG member 1 (gene/pseudogene))

Identity

Alias_namesOR2AG3
olfactory receptor, family 2, subfamily AG, member 1 (gene/pseudogene)
Other aliasOR11-79
HGNC (Hugo) OR2AG1
LocusID (NCBI) 144125
Atlas_Id 71241
Location 11p15.4  [Link to chromosome band 11p15]
Location_base_pair Starts at 6785017 and ends at 6786014 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR2AG1   15142
Cards
Entrez_Gene (NCBI)OR2AG1  144125  olfactory receptor family 2 subfamily AG member 1 (gene/pseudogene)
AliasesOR11-79; OR2AG3
GeneCards (Weizmann)OR2AG1
Ensembl hg19 (Hinxton)ENSG00000170803 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000170803 [Gene_View]  chr11:6785017-6786014 [Contig_View]  OR2AG1 [Vega]
ICGC DataPortalENSG00000170803
TCGA cBioPortalOR2AG1
AceView (NCBI)OR2AG1
Genatlas (Paris)OR2AG1
WikiGenes144125
SOURCE (Princeton)OR2AG1
Genetics Home Reference (NIH)OR2AG1
Genomic and cartography
GoldenPath hg38 (UCSC)OR2AG1  -     chr11:6785017-6786014 +  11p15.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR2AG1  -     11p15.4   [Description]    (hg19-Feb_2009)
EnsemblOR2AG1 - 11p15.4 [CytoView hg19]  OR2AG1 - 11p15.4 [CytoView hg38]
Mapping of homologs : NCBIOR2AG1 [Mapview hg19]  OR2AG1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC151143
RefSeq transcript (Entrez)NM_001004489
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR2AG1
Cluster EST : UnigeneHs.553608 [ NCBI ]
CGAP (NCI)Hs.553608
Alternative Splicing GalleryENSG00000170803
Gene ExpressionOR2AG1 [ NCBI-GEO ]   OR2AG1 [ EBI - ARRAY_EXPRESS ]   OR2AG1 [ SEEK ]   OR2AG1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR2AG1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)144125
GTEX Portal (Tissue expression)OR2AG1
Human Protein AtlasENSG00000170803-OR2AG1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H205   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H205  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H205
Splice isoforms : SwissVarQ9H205
PhosPhoSitePlusQ9H205
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt    OR2AG1   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR2AG1
DMDM Disease mutations144125
Blocks (Seattle)OR2AG1
SuperfamilyQ9H205
Human Protein Atlas [tissue]ENSG00000170803-OR2AG1 [tissue]
Peptide AtlasQ9H205
HPRD14935
IPIIPI00022324   
Protein Interaction databases
DIP (DOE-UCLA)Q9H205
IntAct (EBI)Q9H205
FunCoupENSG00000170803
BioGRIDOR2AG1
STRING (EMBL)OR2AG1
ZODIACOR2AG1
Ontologies - Pathways
QuickGOQ9H205
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  protein binding  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  protein binding  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR2AG1
Atlas of Cancer Signalling NetworkOR2AG1
Wikipedia pathwaysOR2AG1
Orthology - Evolution
OrthoDB144125
GeneTree (enSembl)ENSG00000170803
Phylogenetic Trees/Animal Genes : TreeFamOR2AG1
HOVERGENQ9H205
HOGENOMQ9H205
Homologs : HomoloGeneOR2AG1
Homology/Alignments : Family Browser (UCSC)OR2AG1
Gene fusions - Rearrangements
Tumor Fusion PortalOR2AG1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR2AG1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR2AG1
dbVarOR2AG1
ClinVarOR2AG1
1000_GenomesOR2AG1 
Exome Variant ServerOR2AG1
ExAC (Exome Aggregation Consortium)ENSG00000170803
GNOMAD BrowserENSG00000170803
Genetic variants : HAPMAP144125
Genomic Variants (DGV)OR2AG1 [DGVbeta]
DECIPHEROR2AG1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR2AG1 
Mutations
ICGC Data PortalOR2AG1 
TCGA Data PortalOR2AG1 
Broad Tumor PortalOR2AG1
OASIS PortalOR2AG1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR2AG1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR2AG1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR2AG1
DgiDB (Drug Gene Interaction Database)OR2AG1
DoCM (Curated mutations)OR2AG1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR2AG1 (select a term)
intoGenOR2AG1
Cancer3DOR2AG1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETOR2AG1
MedgenOR2AG1
Genetic Testing Registry OR2AG1
NextProtQ9H205 [Medical]
TSGene144125
GENETestsOR2AG1
Target ValidationOR2AG1
Huge Navigator OR2AG1 [HugePedia]
snp3D : Map Gene to Disease144125
BioCentury BCIQOR2AG1
ClinGenOR2AG1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD144125
Chemical/Pharm GKB GenePA32126
Clinical trialOR2AG1
Miscellaneous
canSAR (ICR)OR2AG1 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR2AG1
EVEXOR2AG1
GoPubMedOR2AG1
iHOPOR2AG1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:24:23 CET 2017

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