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OR2AK2 (olfactory receptor family 2 subfamily AK member 2)

Identity

Alias_namesOR2AK1P
olfactory receptor, family 2, subfamily AK, member 2
Other aliasOR1-47
HGNC (Hugo) OR2AK2
LocusID (NCBI) 391191
Atlas_Id 71243
Location 1q44  [Link to chromosome band 1q44]
Location_base_pair Starts at 247965332 and ends at 247966339 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR2AK2   19569
Cards
Entrez_Gene (NCBI)OR2AK2  391191  olfactory receptor family 2 subfamily AK member 2
AliasesOR1-47; OR2AK1P
GeneCards (Weizmann)OR2AK2
Ensembl hg19 (Hinxton)ENSG00000187080 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000187080 [Gene_View]  chr1:247965332-247966339 [Contig_View]  OR2AK2 [Vega]
ICGC DataPortalENSG00000187080
TCGA cBioPortalOR2AK2
AceView (NCBI)OR2AK2
Genatlas (Paris)OR2AK2
WikiGenes391191
SOURCE (Princeton)OR2AK2
Genetics Home Reference (NIH)OR2AK2
Genomic and cartography
GoldenPath hg38 (UCSC)OR2AK2  -     chr1:247965332-247966339 +  1q44   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR2AK2  -     1q44   [Description]    (hg19-Feb_2009)
EnsemblOR2AK2 - 1q44 [CytoView hg19]  OR2AK2 - 1q44 [CytoView hg38]
Mapping of homologs : NCBIOR2AK2 [Mapview hg19]  OR2AK2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC136816
RefSeq transcript (Entrez)NM_001004491
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR2AK2
Cluster EST : UnigeneHs.690413 [ NCBI ]
CGAP (NCI)Hs.690413
Alternative Splicing GalleryENSG00000187080
Gene ExpressionOR2AK2 [ NCBI-GEO ]   OR2AK2 [ EBI - ARRAY_EXPRESS ]   OR2AK2 [ SEEK ]   OR2AK2 [ MEM ]
Gene Expression Viewer (FireBrowse)OR2AK2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)391191
GTEX Portal (Tissue expression)OR2AK2
Human Protein AtlasENSG00000187080-OR2AK2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NG84   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NG84  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NG84
Splice isoforms : SwissVarQ8NG84
PhosPhoSitePlusQ8NG84
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR2AK2
DMDM Disease mutations391191
Blocks (Seattle)OR2AK2
SuperfamilyQ8NG84
Human Protein Atlas [tissue]ENSG00000187080-OR2AK2 [tissue]
Peptide AtlasQ8NG84
HPRD17693
IPIIPI00386284   
Protein Interaction databases
DIP (DOE-UCLA)Q8NG84
IntAct (EBI)Q8NG84
FunCoupENSG00000187080
BioGRIDOR2AK2
STRING (EMBL)OR2AK2
ZODIACOR2AK2
Ontologies - Pathways
QuickGOQ8NG84
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR2AK2
Atlas of Cancer Signalling NetworkOR2AK2
Wikipedia pathwaysOR2AK2
Orthology - Evolution
OrthoDB391191
GeneTree (enSembl)ENSG00000187080
Phylogenetic Trees/Animal Genes : TreeFamOR2AK2
HOVERGENQ8NG84
HOGENOMQ8NG84
Homologs : HomoloGeneOR2AK2
Homology/Alignments : Family Browser (UCSC)OR2AK2
Gene fusions - Rearrangements
Fusion: Tumor Portal OR2AK2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR2AK2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR2AK2
dbVarOR2AK2
ClinVarOR2AK2
1000_GenomesOR2AK2 
Exome Variant ServerOR2AK2
ExAC (Exome Aggregation Consortium)ENSG00000187080
GNOMAD BrowserENSG00000187080
Genetic variants : HAPMAP391191
Genomic Variants (DGV)OR2AK2 [DGVbeta]
DECIPHEROR2AK2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR2AK2 
Mutations
ICGC Data PortalOR2AK2 
TCGA Data PortalOR2AK2 
Broad Tumor PortalOR2AK2
OASIS PortalOR2AK2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR2AK2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR2AK2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR2AK2
DgiDB (Drug Gene Interaction Database)OR2AK2
DoCM (Curated mutations)OR2AK2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR2AK2 (select a term)
intoGenOR2AK2
Cancer3DOR2AK2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR2AK2
Genetic Testing Registry OR2AK2
NextProtQ8NG84 [Medical]
TSGene391191
GENETestsOR2AK2
Target ValidationOR2AK2
Huge Navigator OR2AK2 [HugePedia]
snp3D : Map Gene to Disease391191
BioCentury BCIQOR2AK2
ClinGenOR2AK2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD391191
Chemical/Pharm GKB GenePA134921949
Clinical trialOR2AK2
Miscellaneous
canSAR (ICR)OR2AK2 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR2AK2
EVEXOR2AK2
GoPubMedOR2AK2
iHOPOR2AK2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:20:17 CET 2017

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