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OR2B11 (olfactory receptor family 2 subfamily B member 11)

Identity

Alias_namesolfactory receptor, family 2, subfamily B, member 11
Other alias-
HGNC (Hugo) OR2B11
LocusID (NCBI) 127623
Atlas_Id 71246
Location 1q44  [Link to chromosome band 1q44]
Location_base_pair Starts at 247451029 and ends at 247451982 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR2B11   31249
Cards
Entrez_Gene (NCBI)OR2B11  127623  olfactory receptor family 2 subfamily B member 11
Aliases
GeneCards (Weizmann)OR2B11
Ensembl hg19 (Hinxton)ENSG00000177535 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000177535 [Gene_View]  chr1:247451029-247451982 [Contig_View]  OR2B11 [Vega]
ICGC DataPortalENSG00000177535
TCGA cBioPortalOR2B11
AceView (NCBI)OR2B11
Genatlas (Paris)OR2B11
WikiGenes127623
SOURCE (Princeton)OR2B11
Genetics Home Reference (NIH)OR2B11
Genomic and cartography
GoldenPath hg38 (UCSC)OR2B11  -     chr1:247451029-247451982 -  1q44   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR2B11  -     1q44   [Description]    (hg19-Feb_2009)
EnsemblOR2B11 - 1q44 [CytoView hg19]  OR2B11 - 1q44 [CytoView hg38]
Mapping of homologs : NCBIOR2B11 [Mapview hg19]  OR2B11 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC137181 BC137205
RefSeq transcript (Entrez)NM_001004492
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR2B11
Cluster EST : UnigeneHs.446999 [ NCBI ]
CGAP (NCI)Hs.446999
Alternative Splicing GalleryENSG00000177535
Gene ExpressionOR2B11 [ NCBI-GEO ]   OR2B11 [ EBI - ARRAY_EXPRESS ]   OR2B11 [ SEEK ]   OR2B11 [ MEM ]
Gene Expression Viewer (FireBrowse)OR2B11 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)127623
GTEX Portal (Tissue expression)OR2B11
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5JQS5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5JQS5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5JQS5
Splice isoforms : SwissVarQ5JQS5
PhosPhoSitePlusQ5JQS5
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR2B11
DMDM Disease mutations127623
Blocks (Seattle)OR2B11
SuperfamilyQ5JQS5
Human Protein AtlasENSG00000177535
Peptide AtlasQ5JQS5
HPRD14937
IPIIPI00453466   
Protein Interaction databases
DIP (DOE-UCLA)Q5JQS5
IntAct (EBI)Q5JQS5
FunCoupENSG00000177535
BioGRIDOR2B11
STRING (EMBL)OR2B11
ZODIACOR2B11
Ontologies - Pathways
QuickGOQ5JQS5
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR2B11
Atlas of Cancer Signalling NetworkOR2B11
Wikipedia pathwaysOR2B11
Orthology - Evolution
OrthoDB127623
GeneTree (enSembl)ENSG00000177535
Phylogenetic Trees/Animal Genes : TreeFamOR2B11
HOVERGENQ5JQS5
HOGENOMQ5JQS5
Homologs : HomoloGeneOR2B11
Homology/Alignments : Family Browser (UCSC)OR2B11
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR2B11 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR2B11
dbVarOR2B11
ClinVarOR2B11
1000_GenomesOR2B11 
Exome Variant ServerOR2B11
ExAC (Exome Aggregation Consortium)OR2B11 (select the gene name)
Genetic variants : HAPMAP127623
Genomic Variants (DGV)OR2B11 [DGVbeta]
DECIPHEROR2B11 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR2B11 
Mutations
ICGC Data PortalOR2B11 
TCGA Data PortalOR2B11 
Broad Tumor PortalOR2B11
OASIS PortalOR2B11 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR2B11  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR2B11
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR2B11
DgiDB (Drug Gene Interaction Database)OR2B11
DoCM (Curated mutations)OR2B11 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR2B11 (select a term)
intoGenOR2B11
Cancer3DOR2B11(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR2B11
Genetic Testing Registry OR2B11
NextProtQ5JQS5 [Medical]
TSGene127623
GENETestsOR2B11
Target ValidationOR2B11
Huge Navigator OR2B11 [HugePedia]
snp3D : Map Gene to Disease127623
BioCentury BCIQOR2B11
ClinGenOR2B11
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD127623
Chemical/Pharm GKB GenePA134961529
Clinical trialOR2B11
Miscellaneous
canSAR (ICR)OR2B11 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR2B11
EVEXOR2B11
GoPubMedOR2B11
iHOPOR2B11
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:32:57 CEST 2017

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