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OR2B2 (olfactory receptor family 2 subfamily B member 2)

Identity

Alias_namesOR2B9
olfactory receptor, family 2, subfamily B, member 9
olfactory receptor, family 2, subfamily B, member 2
Alias_symbol (synonym)hs6M1-10
OR6-1
OR2B2Q
Other aliasdJ193B12.4
HGNC (Hugo) OR2B2
LocusID (NCBI) 81697
Atlas_Id 71247
Location 6p22.1  [Link to chromosome band 6p22]
Location_base_pair Starts at 27911185 and ends at 27912396 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR2B2   13966
Cards
Entrez_Gene (NCBI)OR2B2  81697  olfactory receptor family 2 subfamily B member 2
AliasesOR2B2Q; OR2B9; OR6-1; dJ193B12.4; 
hs6M1-10
GeneCards (Weizmann)OR2B2
Ensembl hg19 (Hinxton)ENSG00000168131 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000168131 [Gene_View]  ENSG00000168131 [Sequence]  chr6:27911185-27912396 [Contig_View]  OR2B2 [Vega]
ICGC DataPortalENSG00000168131
TCGA cBioPortalOR2B2
AceView (NCBI)OR2B2
Genatlas (Paris)OR2B2
WikiGenes81697
SOURCE (Princeton)OR2B2
Genetics Home Reference (NIH)OR2B2
Genomic and cartography
GoldenPath hg38 (UCSC)OR2B2  -     chr6:27911185-27912396 -  6p22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR2B2  -     6p22.1   [Description]    (hg19-Feb_2009)
EnsemblOR2B2 - 6p22.1 [CytoView hg19]  OR2B2 - 6p22.1 [CytoView hg38]
Mapping of homologs : NCBIOR2B2 [Mapview hg19]  OR2B2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC136881 BC136901
RefSeq transcript (Entrez)NM_033057
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR2B2
Cluster EST : UnigeneHs.307111 [ NCBI ]
CGAP (NCI)Hs.307111
Alternative Splicing GalleryENSG00000168131
Gene ExpressionOR2B2 [ NCBI-GEO ]   OR2B2 [ EBI - ARRAY_EXPRESS ]   OR2B2 [ SEEK ]   OR2B2 [ MEM ]
Gene Expression Viewer (FireBrowse)OR2B2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)81697
GTEX Portal (Tissue expression)OR2B2
Human Protein AtlasENSG00000168131-OR2B2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9GZK3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9GZK3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9GZK3
Splice isoforms : SwissVarQ9GZK3
PhosPhoSitePlusQ9GZK3
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR2B2
DMDM Disease mutations81697
Blocks (Seattle)OR2B2
SuperfamilyQ9GZK3
Human Protein Atlas [tissue]ENSG00000168131-OR2B2 [tissue]
Peptide AtlasQ9GZK3
HPRD17695
IPIIPI00304219   
Protein Interaction databases
DIP (DOE-UCLA)Q9GZK3
IntAct (EBI)Q9GZK3
FunCoupENSG00000168131
BioGRIDOR2B2
STRING (EMBL)OR2B2
ZODIACOR2B2
Ontologies - Pathways
QuickGOQ9GZK3
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
NDEx NetworkOR2B2
Atlas of Cancer Signalling NetworkOR2B2
Wikipedia pathwaysOR2B2
Orthology - Evolution
OrthoDB81697
GeneTree (enSembl)ENSG00000168131
Phylogenetic Trees/Animal Genes : TreeFamOR2B2
HOVERGENQ9GZK3
HOGENOMQ9GZK3
Homologs : HomoloGeneOR2B2
Homology/Alignments : Family Browser (UCSC)OR2B2
Gene fusions - Rearrangements
Fusion : QuiverOR2B2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR2B2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR2B2
dbVarOR2B2
ClinVarOR2B2
1000_GenomesOR2B2 
Exome Variant ServerOR2B2
ExAC (Exome Aggregation Consortium)ENSG00000168131
GNOMAD BrowserENSG00000168131
Varsome BrowserOR2B2
Genetic variants : HAPMAP81697
Genomic Variants (DGV)OR2B2 [DGVbeta]
DECIPHEROR2B2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR2B2 
Mutations
ICGC Data PortalOR2B2 
TCGA Data PortalOR2B2 
Broad Tumor PortalOR2B2
OASIS PortalOR2B2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR2B2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR2B2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR2B2
DgiDB (Drug Gene Interaction Database)OR2B2
DoCM (Curated mutations)OR2B2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR2B2 (select a term)
intoGenOR2B2
Cancer3DOR2B2(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETOR2B2
MedgenOR2B2
Genetic Testing Registry OR2B2
NextProtQ9GZK3 [Medical]
TSGene81697
GENETestsOR2B2
Target ValidationOR2B2
Huge Navigator OR2B2 [HugePedia]
snp3D : Map Gene to Disease81697
BioCentury BCIQOR2B2
ClinGenOR2B2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD81697
Chemical/Pharm GKB GenePA32141
Clinical trialOR2B2
Miscellaneous
canSAR (ICR)OR2B2 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR2B2
EVEXOR2B2
GoPubMedOR2B2
iHOPOR2B2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 14:21:27 CEST 2018

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