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OR2B3 (olfactory receptor family 2 subfamily B member 3)

Identity

Alias_namesOR2B3P
olfactory receptor, family 2, subfamily B, member 3 pseudogene
olfactory receptor, family 2, subfamily B, member 3
Alias_symbol (synonym)OR6-4
Other alias6M1-1
OR6-14
HGNC (Hugo) OR2B3
LocusID (NCBI) 442184
Atlas_Id 71248
Location 6p22.1  [Link to chromosome band 6p22]
Location_base_pair Starts at 29086208 and ends at 29087313 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR2B3   8238
Cards
Entrez_Gene (NCBI)OR2B3  442184  olfactory receptor family 2 subfamily B member 3
Aliases6M1-1; OR2B3P; OR6-14; OR6-4
GeneCards (Weizmann)OR2B3
Ensembl hg19 (Hinxton)ENSG00000204703 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204703 [Gene_View]  ENSG00000204703 [Sequence]  chr6:29086208-29087313 [Contig_View]  OR2B3 [Vega]
ICGC DataPortalENSG00000204703
TCGA cBioPortalOR2B3
AceView (NCBI)OR2B3
Genatlas (Paris)OR2B3
WikiGenes442184
SOURCE (Princeton)OR2B3
Genetics Home Reference (NIH)OR2B3
Genomic and cartography
GoldenPath hg38 (UCSC)OR2B3  -     chr6:29086208-29087313 -  6p22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR2B3  -     6p22.1   [Description]    (hg19-Feb_2009)
EnsemblOR2B3 - 6p22.1 [CytoView hg19]  OR2B3 - 6p22.1 [CytoView hg38]
Mapping of homologs : NCBIOR2B3 [Mapview hg19]  OR2B3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AJ459864 AJ459872 AJ459873 BC136817 BC136818
RefSeq transcript (Entrez)NM_001005226
RefSeq genomic (Entrez)NC_000006 NC_018917 NG_008395 NT_113891 NT_167244 NT_167245 NT_167246 NT_167247 NT_167248 NT_167249
Consensus coding sequences : CCDS (NCBI)OR2B3
Cluster EST : UnigeneHs.553835 [ NCBI ]
CGAP (NCI)Hs.553835
Alternative Splicing GalleryENSG00000204703
Gene ExpressionOR2B3 [ NCBI-GEO ]   OR2B3 [ EBI - ARRAY_EXPRESS ]   OR2B3 [ SEEK ]   OR2B3 [ MEM ]
Gene Expression Viewer (FireBrowse)OR2B3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)442184
GTEX Portal (Tissue expression)OR2B3
Human Protein AtlasENSG00000204703-OR2B3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO76000   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO76000  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO76000
Splice isoforms : SwissVarO76000
PhosPhoSitePlusO76000
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR2B3
DMDM Disease mutations442184
Blocks (Seattle)OR2B3
SuperfamilyO76000
Human Protein Atlas [tissue]ENSG00000204703-OR2B3 [tissue]
Peptide AtlasO76000
HPRD14938
IPIIPI00008676   
Protein Interaction databases
DIP (DOE-UCLA)O76000
IntAct (EBI)O76000
FunCoupENSG00000204703
BioGRIDOR2B3
STRING (EMBL)OR2B3
ZODIACOR2B3
Ontologies - Pathways
QuickGOO76000
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
NDEx NetworkOR2B3
Atlas of Cancer Signalling NetworkOR2B3
Wikipedia pathwaysOR2B3
Orthology - Evolution
OrthoDB442184
GeneTree (enSembl)ENSG00000204703
Phylogenetic Trees/Animal Genes : TreeFamOR2B3
HOVERGENO76000
HOGENOMO76000
Homologs : HomoloGeneOR2B3
Homology/Alignments : Family Browser (UCSC)OR2B3
Gene fusions - Rearrangements
Fusion : QuiverOR2B3
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR2B3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR2B3
dbVarOR2B3
ClinVarOR2B3
1000_GenomesOR2B3 
Exome Variant ServerOR2B3
ExAC (Exome Aggregation Consortium)ENSG00000204703
GNOMAD BrowserENSG00000204703
Varsome BrowserOR2B3
Genetic variants : HAPMAP442184
Genomic Variants (DGV)OR2B3 [DGVbeta]
DECIPHEROR2B3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR2B3 
Mutations
ICGC Data PortalOR2B3 
TCGA Data PortalOR2B3 
Broad Tumor PortalOR2B3
OASIS PortalOR2B3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR2B3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR2B3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR2B3
DgiDB (Drug Gene Interaction Database)OR2B3
DoCM (Curated mutations)OR2B3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR2B3 (select a term)
intoGenOR2B3
Cancer3DOR2B3(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETOR2B3
MedgenOR2B3
Genetic Testing Registry OR2B3
NextProtO76000 [Medical]
TSGene442184
GENETestsOR2B3
Target ValidationOR2B3
Huge Navigator OR2B3 [HugePedia]
snp3D : Map Gene to Disease442184
BioCentury BCIQOR2B3
ClinGenOR2B3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD442184
Chemical/Pharm GKB GenePA32142
Clinical trialOR2B3
Miscellaneous
canSAR (ICR)OR2B3 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR2B3
EVEXOR2B3
GoPubMedOR2B3
iHOPOR2B3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 14:21:27 CEST 2018

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