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OR2F1 (olfactory receptor family 2 subfamily F member 1)

Identity

Alias (NCBI)7M1-2
OLF3
OR14-60
OR2F3
OR2F3P
OR2F4
OR2F5
OR7-139
OR7-140
HGNC (Hugo) OR2F1
HGNC Alias symbOLF3
OR7-140
OR7-139
OR14-60
HGNC Previous nameOR2F4
 OR2F5
 OR2F3
 OR2F3P
HGNC Previous nameolfactory receptor, family 2, subfamily F, member 1
 olfactory receptor, family 2, subfamily F, member 1 (gene/pseudogene)
LocusID (NCBI) 26211
Atlas_Id 71254
Location 7q35  [Link to chromosome band 7q35]
Location_base_pair Starts at 143959927 and ends at 143961015 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)OR2F1   8246
Cards
Entrez_Gene (NCBI)OR2F1    olfactory receptor family 2 subfamily F member 1
Aliases7M1-2; OLF3; OR14-60; OR2F3; 
OR2F3P; OR2F4; OR2F5; OR7-139; OR7-140
GeneCards (Weizmann)OR2F1
Ensembl hg19 (Hinxton)ENSG00000213215 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000213215 [Gene_View]  ENSG00000213215 [Sequence]  chr7:143959927-143961015 [Contig_View]  OR2F1 [Vega]
ICGC DataPortalENSG00000213215
TCGA cBioPortalOR2F1
AceView (NCBI)OR2F1
Genatlas (Paris)OR2F1
SOURCE (Princeton)OR2F1
Genetics Home Reference (NIH)OR2F1
Genomic and cartography
GoldenPath hg38 (UCSC)OR2F1  -     chr7:143959927-143961015 +  7q35   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR2F1  -     7q35   [Description]    (hg19-Feb_2009)
GoldenPathOR2F1 - 7q35 [CytoView hg19]  OR2F1 - 7q35 [CytoView hg38]
ImmunoBaseENSG00000213215
Genome Data Viewer NCBIOR2F1 [Mapview hg19]  
OMIM608497   
Gene and transcription
Genbank (Entrez)AJ459868 AJ459869 BC104975
RefSeq transcript (Entrez)NM_012369
Consensus coding sequences : CCDS (NCBI)OR2F1
Gene ExpressionOR2F1 [ NCBI-GEO ]   OR2F1 [ EBI - ARRAY_EXPRESS ]   OR2F1 [ SEEK ]   OR2F1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR2F1 [ Firebrowse - Broad ]
GenevisibleExpression of OR2F1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26211
GTEX Portal (Tissue expression)OR2F1
Human Protein AtlasENSG00000213215-OR2F1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ13607   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ13607  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ13607
PhosPhoSitePlusQ13607
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)7tm_4 (PF13853)   
Domain families : Pfam (NCBI)pfam13853   
Conserved Domain (NCBI)OR2F1
SuperfamilyQ13607
AlphaFold pdb e-kbQ13607   
Human Protein Atlas [tissue]ENSG00000213215-OR2F1 [tissue]
HPRD16340
Protein Interaction databases
DIP (DOE-UCLA)Q13607
IntAct (EBI)Q13607
BioGRIDOR2F1
STRING (EMBL)OR2F1
ZODIACOR2F1
Ontologies - Pathways
QuickGOQ13607
Ontology : AmiGOG protein-coupled receptor activity  olfactory receptor activity  plasma membrane  signal transduction  G protein-coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG protein-coupled receptor activity  olfactory receptor activity  plasma membrane  signal transduction  G protein-coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
NDEx NetworkOR2F1
Atlas of Cancer Signalling NetworkOR2F1
Wikipedia pathwaysOR2F1
Orthology - Evolution
OrthoDB26211
GeneTree (enSembl)ENSG00000213215
Phylogenetic Trees/Animal Genes : TreeFamOR2F1
Homologs : HomoloGeneOR2F1
Homology/Alignments : Family Browser (UCSC)OR2F1
Gene fusions - Rearrangements
Fusion : QuiverOR2F1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR2F1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR2F1
dbVarOR2F1
ClinVarOR2F1
MonarchOR2F1
1000_GenomesOR2F1 
Exome Variant ServerOR2F1
GNOMAD BrowserENSG00000213215
Varsome BrowserOR2F1
ACMGOR2F1 variants
VarityQ13607
Genomic Variants (DGV)OR2F1 [DGVbeta]
DECIPHEROR2F1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR2F1 
Mutations
ICGC Data PortalOR2F1 
TCGA Data PortalOR2F1 
Broad Tumor PortalOR2F1
OASIS PortalOR2F1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR2F1  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DOR2F1
Mutations and Diseases : HGMDOR2F1
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaOR2F1
DgiDB (Drug Gene Interaction Database)OR2F1
DoCM (Curated mutations)OR2F1
CIViC (Clinical Interpretations of Variants in Cancer)OR2F1
Cancer3DOR2F1
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608497   
Orphanet
DisGeNETOR2F1
MedgenOR2F1
Genetic Testing Registry OR2F1
NextProtQ13607 [Medical]
GENETestsOR2F1
Target ValidationOR2F1
Huge Navigator OR2F1 [HugePedia]
ClinGenOR2F1
Clinical trials, drugs, therapy
MyCancerGenomeOR2F1
Protein Interactions : CTDOR2F1
Pharm GKB GenePA32155
PharosQ13607
Clinical trialOR2F1
Miscellaneous
canSAR (ICR)OR2F1
HarmonizomeOR2F1
DataMed IndexOR2F1
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXOR2F1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:14:04 CEST 2021

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