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OR2F2 (olfactory receptor, family 2, subfamily F, member 2)

Identity

Alias_namesolfactory receptor, family 2, subfamily F, member 2
Alias_symbol (synonym)OR7-1
Other alias
HGNC (Hugo) OR2F2
LocusID (NCBI) 135948
Atlas_Id 71255
Location 7q35  [Link to chromosome band 7q35]
Location_base_pair Starts at 143632326 and ends at 143633279 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR2F2   8247
Cards
Entrez_Gene (NCBI)OR2F2  135948  olfactory receptor, family 2, subfamily F, member 2
AliasesOR7-1
GeneCards (Weizmann)OR2F2
Ensembl hg19 (Hinxton)ENSG00000221910 [Gene_View]  chr7:143632326-143633279 [Contig_View]  OR2F2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000221910 [Gene_View]  chr7:143632326-143633279 [Contig_View]  OR2F2 [Vega]
ICGC DataPortalENSG00000221910
TCGA cBioPortalOR2F2
AceView (NCBI)OR2F2
Genatlas (Paris)OR2F2
WikiGenes135948
SOURCE (Princeton)OR2F2
Genetics Home Reference (NIH)OR2F2
Genomic and cartography
GoldenPath hg19 (UCSC)OR2F2  -     chr7:143632326-143633279 +  7q35   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)OR2F2  -     7q35   [Description]    (hg38-Dec_2013)
EnsemblOR2F2 - 7q35 [CytoView hg19]  OR2F2 - 7q35 [CytoView hg38]
Mapping of homologs : NCBIOR2F2 [Mapview hg19]  OR2F2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC136812 BC136813
RefSeq transcript (Entrez)NM_001004685
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007933 NW_004929333
Consensus coding sequences : CCDS (NCBI)OR2F2
Cluster EST : UnigeneHs.553596 [ NCBI ]
CGAP (NCI)Hs.553596
Alternative Splicing GalleryENSG00000221910
Gene ExpressionOR2F2 [ NCBI-GEO ]   OR2F2 [ EBI - ARRAY_EXPRESS ]   OR2F2 [ SEEK ]   OR2F2 [ MEM ]
Gene Expression Viewer (FireBrowse)OR2F2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)135948
GTEX Portal (Tissue expression)OR2F2
Protein : pattern, domain, 3D structure
UniProt/SwissProtO95006   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO95006  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO95006
Splice isoforms : SwissVarO95006
PhosPhoSitePlusO95006
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR2F2
DMDM Disease mutations135948
Blocks (Seattle)OR2F2
SuperfamilyO95006
Human Protein AtlasENSG00000221910
Peptide AtlasO95006
HPRD14939
IPIIPI00028203   
Protein Interaction databases
DIP (DOE-UCLA)O95006
IntAct (EBI)O95006
FunCoupENSG00000221910
BioGRIDOR2F2
STRING (EMBL)OR2F2
ZODIACOR2F2
Ontologies - Pathways
QuickGOO95006
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR2F2
Atlas of Cancer Signalling NetworkOR2F2
Wikipedia pathwaysOR2F2
Orthology - Evolution
OrthoDB135948
GeneTree (enSembl)ENSG00000221910
Phylogenetic Trees/Animal Genes : TreeFamOR2F2
HOVERGENO95006
HOGENOMO95006
Homologs : HomoloGeneOR2F2
Homology/Alignments : Family Browser (UCSC)OR2F2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR2F2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR2F2
dbVarOR2F2
ClinVarOR2F2
1000_GenomesOR2F2 
Exome Variant ServerOR2F2
ExAC (Exome Aggregation Consortium)OR2F2 (select the gene name)
Genetic variants : HAPMAP135948
Genomic Variants (DGV)OR2F2 [DGVbeta]
DECIPHER (Syndromes)7:143632326-143633279  ENSG00000221910
CONAN: Copy Number AnalysisOR2F2 
Mutations
ICGC Data PortalOR2F2 
TCGA Data PortalOR2F2 
Broad Tumor PortalOR2F2
OASIS PortalOR2F2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR2F2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR2F2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR2F2
DgiDB (Drug Gene Interaction Database)OR2F2
DoCM (Curated mutations)OR2F2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR2F2 (select a term)
intoGenOR2F2
Cancer3DOR2F2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR2F2
Genetic Testing Registry OR2F2
NextProtO95006 [Medical]
TSGene135948
GENETestsOR2F2
Huge Navigator OR2F2 [HugePedia]
snp3D : Map Gene to Disease135948
BioCentury BCIQOR2F2
ClinGenOR2F2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD135948
Chemical/Pharm GKB GenePA32156
Clinical trialOR2F2
Miscellaneous
canSAR (ICR)OR2F2 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR2F2
EVEXOR2F2
GoPubMedOR2F2
iHOPOR2F2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:36:21 CET 2017

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