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OR2G2 (olfactory receptor family 2 subfamily G member 2)

Identity

Alias_namesolfactory receptor, family 2, subfamily G, member 2 pseudogene
olfactory receptor, family 2, subfamily G, member 2
Other aliasOR1-32
HGNC (Hugo) OR2G2
LocusID (NCBI) 81470
Atlas_Id 71256
Location 1q44  [Link to chromosome band 1q44]
Location_base_pair Starts at 247588360 and ends at 247589313 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR2G2   15007
Cards
Entrez_Gene (NCBI)OR2G2  81470  olfactory receptor family 2 subfamily G member 2
AliasesOR1-32
GeneCards (Weizmann)OR2G2
Ensembl hg19 (Hinxton)ENSG00000177489 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000177489 [Gene_View]  chr1:247588360-247589313 [Contig_View]  OR2G2 [Vega]
ICGC DataPortalENSG00000177489
TCGA cBioPortalOR2G2
AceView (NCBI)OR2G2
Genatlas (Paris)OR2G2
WikiGenes81470
SOURCE (Princeton)OR2G2
Genetics Home Reference (NIH)OR2G2
Genomic and cartography
GoldenPath hg38 (UCSC)OR2G2  -     chr1:247588360-247589313 +  1q44   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR2G2  -     1q44   [Description]    (hg19-Feb_2009)
EnsemblOR2G2 - 1q44 [CytoView hg19]  OR2G2 - 1q44 [CytoView hg38]
Mapping of homologs : NCBIOR2G2 [Mapview hg19]  OR2G2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001001915
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR2G2
Cluster EST : UnigeneHs.690208 [ NCBI ]
CGAP (NCI)Hs.690208
Alternative Splicing GalleryENSG00000177489
Gene ExpressionOR2G2 [ NCBI-GEO ]   OR2G2 [ EBI - ARRAY_EXPRESS ]   OR2G2 [ SEEK ]   OR2G2 [ MEM ]
Gene Expression Viewer (FireBrowse)OR2G2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)81470
GTEX Portal (Tissue expression)OR2G2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGZ5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGZ5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGZ5
Splice isoforms : SwissVarQ8NGZ5
PhosPhoSitePlusQ8NGZ5
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR2G2
DMDM Disease mutations81470
Blocks (Seattle)OR2G2
SuperfamilyQ8NGZ5
Human Protein AtlasENSG00000177489
Peptide AtlasQ8NGZ5
HPRD11412
IPIIPI00303770   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGZ5
IntAct (EBI)Q8NGZ5
FunCoupENSG00000177489
BioGRIDOR2G2
STRING (EMBL)OR2G2
ZODIACOR2G2
Ontologies - Pathways
QuickGOQ8NGZ5
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR2G2
Atlas of Cancer Signalling NetworkOR2G2
Wikipedia pathwaysOR2G2
Orthology - Evolution
OrthoDB81470
GeneTree (enSembl)ENSG00000177489
Phylogenetic Trees/Animal Genes : TreeFamOR2G2
HOVERGENQ8NGZ5
HOGENOMQ8NGZ5
Homologs : HomoloGeneOR2G2
Homology/Alignments : Family Browser (UCSC)OR2G2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR2G2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR2G2
dbVarOR2G2
ClinVarOR2G2
1000_GenomesOR2G2 
Exome Variant ServerOR2G2
ExAC (Exome Aggregation Consortium)OR2G2 (select the gene name)
Genetic variants : HAPMAP81470
Genomic Variants (DGV)OR2G2 [DGVbeta]
DECIPHEROR2G2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR2G2 
Mutations
ICGC Data PortalOR2G2 
TCGA Data PortalOR2G2 
Broad Tumor PortalOR2G2
OASIS PortalOR2G2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR2G2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR2G2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR2G2
DgiDB (Drug Gene Interaction Database)OR2G2
DoCM (Curated mutations)OR2G2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR2G2 (select a term)
intoGenOR2G2
Cancer3DOR2G2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR2G2
Genetic Testing Registry OR2G2
NextProtQ8NGZ5 [Medical]
TSGene81470
GENETestsOR2G2
Target ValidationOR2G2
Huge Navigator OR2G2 [HugePedia]
snp3D : Map Gene to Disease81470
BioCentury BCIQOR2G2
ClinGenOR2G2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD81470
Chemical/Pharm GKB GenePA32159
Clinical trialOR2G2
Miscellaneous
canSAR (ICR)OR2G2 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR2G2
EVEXOR2G2
GoPubMedOR2G2
iHOPOR2G2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:34:06 CEST 2017

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