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OR2K2 (olfactory receptor family 2 subfamily K member 2)

Identity

Alias_namesOR2AR1P
olfactory receptor, family 2, subfamily K, member 2
Alias_symbol (synonym)HTPCRH06
HSHTPCRH06
Other aliasOR2AN1P
HGNC (Hugo) OR2K2
LocusID (NCBI) 26248
Atlas_Id 71263
Location 9q31.3  [Link to chromosome band 9q31]
Location_base_pair Starts at 111327483 and ends at 111328433 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR2K2   8264
Cards
Entrez_Gene (NCBI)OR2K2  26248  olfactory receptor family 2 subfamily K member 2
AliasesHSHTPCRH06; HTPCRH06; OR2AN1P; OR2AR1P
GeneCards (Weizmann)OR2K2
Ensembl hg19 (Hinxton)ENSG00000171133 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000171133 [Gene_View]  chr9:111327483-111328433 [Contig_View]  OR2K2 [Vega]
ICGC DataPortalENSG00000171133
TCGA cBioPortalOR2K2
AceView (NCBI)OR2K2
Genatlas (Paris)OR2K2
WikiGenes26248
SOURCE (Princeton)OR2K2
Genetics Home Reference (NIH)OR2K2
Genomic and cartography
GoldenPath hg38 (UCSC)OR2K2  -     chr9:111327483-111328433 -  9q31.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR2K2  -     9q31.3   [Description]    (hg19-Feb_2009)
EnsemblOR2K2 - 9q31.3 [CytoView hg19]  OR2K2 - 9q31.3 [CytoView hg38]
Mapping of homologs : NCBIOR2K2 [Mapview hg19]  OR2K2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC111086 X64977
RefSeq transcript (Entrez)NM_205859
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR2K2
Cluster EST : UnigeneHs.381312 [ NCBI ]
CGAP (NCI)Hs.381312
Alternative Splicing GalleryENSG00000171133
Gene ExpressionOR2K2 [ NCBI-GEO ]   OR2K2 [ EBI - ARRAY_EXPRESS ]   OR2K2 [ SEEK ]   OR2K2 [ MEM ]
Gene Expression Viewer (FireBrowse)OR2K2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26248
GTEX Portal (Tissue expression)OR2K2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGT1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGT1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGT1
Splice isoforms : SwissVarQ8NGT1
PhosPhoSitePlusQ8NGT1
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR2K2
DMDM Disease mutations26248
Blocks (Seattle)OR2K2
SuperfamilyQ8NGT1
Human Protein AtlasENSG00000171133
Peptide AtlasQ8NGT1
HPRD17701
IPIIPI00743548   IPI00915245   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGT1
IntAct (EBI)Q8NGT1
FunCoupENSG00000171133
BioGRIDOR2K2
STRING (EMBL)OR2K2
ZODIACOR2K2
Ontologies - Pathways
QuickGOQ8NGT1
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR2K2
Atlas of Cancer Signalling NetworkOR2K2
Wikipedia pathwaysOR2K2
Orthology - Evolution
OrthoDB26248
GeneTree (enSembl)ENSG00000171133
Phylogenetic Trees/Animal Genes : TreeFamOR2K2
HOVERGENQ8NGT1
HOGENOMQ8NGT1
Homologs : HomoloGeneOR2K2
Homology/Alignments : Family Browser (UCSC)OR2K2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR2K2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR2K2
dbVarOR2K2
ClinVarOR2K2
1000_GenomesOR2K2 
Exome Variant ServerOR2K2
ExAC (Exome Aggregation Consortium)OR2K2 (select the gene name)
Genetic variants : HAPMAP26248
Genomic Variants (DGV)OR2K2 [DGVbeta]
DECIPHEROR2K2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR2K2 
Mutations
ICGC Data PortalOR2K2 
TCGA Data PortalOR2K2 
Broad Tumor PortalOR2K2
OASIS PortalOR2K2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR2K2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR2K2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR2K2
DgiDB (Drug Gene Interaction Database)OR2K2
DoCM (Curated mutations)OR2K2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR2K2 (select a term)
intoGenOR2K2
Cancer3DOR2K2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR2K2
Genetic Testing Registry OR2K2
NextProtQ8NGT1 [Medical]
TSGene26248
GENETestsOR2K2
Target ValidationOR2K2
Huge Navigator OR2K2 [HugePedia]
snp3D : Map Gene to Disease26248
BioCentury BCIQOR2K2
ClinGenOR2K2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26248
Chemical/Pharm GKB GenePA32181
Clinical trialOR2K2
Miscellaneous
canSAR (ICR)OR2K2 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR2K2
EVEXOR2K2
GoPubMedOR2K2
iHOPOR2K2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:34:07 CEST 2017

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