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OR2L13 (olfactory receptor family 2 subfamily L member 13)

Identity

Alias_namesOR2L14
olfactory receptor, family 2, subfamily L, member 13
Other alias
HGNC (Hugo) OR2L13
LocusID (NCBI) 284521
Atlas_Id 71264
Location 1q44  [Link to chromosome band 1q44]
Location_base_pair Starts at 247937029 and ends at 248100922 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR2L13   19578
Cards
Entrez_Gene (NCBI)OR2L13  284521  olfactory receptor family 2 subfamily L member 13
AliasesOR2L14
GeneCards (Weizmann)OR2L13
Ensembl hg19 (Hinxton)ENSG00000196071 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000196071 [Gene_View]  chr1:247937029-248100922 [Contig_View]  OR2L13 [Vega]
ICGC DataPortalENSG00000196071
TCGA cBioPortalOR2L13
AceView (NCBI)OR2L13
Genatlas (Paris)OR2L13
WikiGenes284521
SOURCE (Princeton)OR2L13
Genetics Home Reference (NIH)OR2L13
Genomic and cartography
GoldenPath hg38 (UCSC)OR2L13  -     chr1:247937029-248100922 +  1q44   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR2L13  -     1q44   [Description]    (hg19-Feb_2009)
EnsemblOR2L13 - 1q44 [CytoView hg19]  OR2L13 - 1q44 [CytoView hg38]
Mapping of homologs : NCBIOR2L13 [Mapview hg19]  OR2L13 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC028158 HQ447997
RefSeq transcript (Entrez)NM_001304535 NM_175911
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR2L13
Cluster EST : UnigeneHs.372936 [ NCBI ]
CGAP (NCI)Hs.372936
Alternative Splicing GalleryENSG00000196071
Gene ExpressionOR2L13 [ NCBI-GEO ]   OR2L13 [ EBI - ARRAY_EXPRESS ]   OR2L13 [ SEEK ]   OR2L13 [ MEM ]
Gene Expression Viewer (FireBrowse)OR2L13 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)284521
GTEX Portal (Tissue expression)OR2L13
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N349   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N349  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N349
Splice isoforms : SwissVarQ8N349
PhosPhoSitePlusQ8N349
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt    OR2L13   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR2L13
DMDM Disease mutations284521
Blocks (Seattle)OR2L13
SuperfamilyQ8N349
Human Protein AtlasENSG00000196071
Peptide AtlasQ8N349
HPRD17702
IPIIPI00166488   
Protein Interaction databases
DIP (DOE-UCLA)Q8N349
IntAct (EBI)Q8N349
FunCoupENSG00000196071
BioGRIDOR2L13
STRING (EMBL)OR2L13
ZODIACOR2L13
Ontologies - Pathways
QuickGOQ8N349
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  protein binding  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  biological_process  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  protein binding  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  biological_process  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR2L13
Atlas of Cancer Signalling NetworkOR2L13
Wikipedia pathwaysOR2L13
Orthology - Evolution
OrthoDB284521
GeneTree (enSembl)ENSG00000196071
Phylogenetic Trees/Animal Genes : TreeFamOR2L13
HOVERGENQ8N349
HOGENOMQ8N349
Homologs : HomoloGeneOR2L13
Homology/Alignments : Family Browser (UCSC)OR2L13
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR2L13 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR2L13
dbVarOR2L13
ClinVarOR2L13
1000_GenomesOR2L13 
Exome Variant ServerOR2L13
ExAC (Exome Aggregation Consortium)OR2L13 (select the gene name)
Genetic variants : HAPMAP284521
Genomic Variants (DGV)OR2L13 [DGVbeta]
DECIPHEROR2L13 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR2L13 
Mutations
ICGC Data PortalOR2L13 
TCGA Data PortalOR2L13 
Broad Tumor PortalOR2L13
OASIS PortalOR2L13 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR2L13  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR2L13
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR2L13
DgiDB (Drug Gene Interaction Database)OR2L13
DoCM (Curated mutations)OR2L13 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR2L13 (select a term)
intoGenOR2L13
Cancer3DOR2L13(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR2L13
Genetic Testing Registry OR2L13
NextProtQ8N349 [Medical]
TSGene284521
GENETestsOR2L13
Target ValidationOR2L13
Huge Navigator OR2L13 [HugePedia]
snp3D : Map Gene to Disease284521
BioCentury BCIQOR2L13
ClinGenOR2L13
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD284521
Chemical/Pharm GKB GenePA134982185
Clinical trialOR2L13
Miscellaneous
canSAR (ICR)OR2L13 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR2L13
EVEXOR2L13
GoPubMedOR2L13
iHOPOR2L13
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:33:00 CEST 2017

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