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OR2L8 (olfactory receptor family 2 subfamily L member 8 (gene/pseudogene))

Identity

Alias_namesolfactory receptor, family 2, subfamily L, member 8
olfactory receptor, family 2, subfamily L, member 8 (gene/pseudogene)
Other alias-
HGNC (Hugo) OR2L8
LocusID (NCBI) 391190
Atlas_Id 71269
Location 1q44  [Link to chromosome band 1q44]
Location_base_pair Starts at 247948858 and ends at 247949796 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR2L8   15014
Cards
Entrez_Gene (NCBI)OR2L8  391190  olfactory receptor family 2 subfamily L member 8 (gene/pseudogene)
Aliases
GeneCards (Weizmann)OR2L8
Ensembl hg19 (Hinxton)ENSG00000196936 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000196936 [Gene_View]  chr1:247948858-247949796 [Contig_View]  OR2L8 [Vega]
ICGC DataPortalENSG00000196936
TCGA cBioPortalOR2L8
AceView (NCBI)OR2L8
Genatlas (Paris)OR2L8
WikiGenes391190
SOURCE (Princeton)OR2L8
Genetics Home Reference (NIH)OR2L8
Genomic and cartography
GoldenPath hg38 (UCSC)OR2L8  -     chr1:247948858-247949796 +  1q44   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR2L8  -     1q44   [Description]    (hg19-Feb_2009)
EnsemblOR2L8 - 1q44 [CytoView hg19]  OR2L8 - 1q44 [CytoView hg38]
Mapping of homologs : NCBIOR2L8 [Mapview hg19]  OR2L8 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC140751
RefSeq transcript (Entrez)NM_001001963
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR2L8
Cluster EST : UnigeneHs.690212 [ NCBI ]
CGAP (NCI)Hs.690212
Alternative Splicing GalleryENSG00000196936
Gene ExpressionOR2L8 [ NCBI-GEO ]   OR2L8 [ EBI - ARRAY_EXPRESS ]   OR2L8 [ SEEK ]   OR2L8 [ MEM ]
Gene Expression Viewer (FireBrowse)OR2L8 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)391190
GTEX Portal (Tissue expression)OR2L8
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGY9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGY9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGY9
Splice isoforms : SwissVarQ8NGY9
PhosPhoSitePlusQ8NGY9
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR2L8
DMDM Disease mutations391190
Blocks (Seattle)OR2L8
SuperfamilyQ8NGY9
Human Protein AtlasENSG00000196936
Peptide AtlasQ8NGY9
HPRD14944
IPIIPI00386391   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGY9
IntAct (EBI)Q8NGY9
FunCoupENSG00000196936
BioGRIDOR2L8
STRING (EMBL)OR2L8
ZODIACOR2L8
Ontologies - Pathways
QuickGOQ8NGY9
Ontology : AmiGOmolecular_function  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  biological_process  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBImolecular_function  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  biological_process  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR2L8
Atlas of Cancer Signalling NetworkOR2L8
Wikipedia pathwaysOR2L8
Orthology - Evolution
OrthoDB391190
GeneTree (enSembl)ENSG00000196936
Phylogenetic Trees/Animal Genes : TreeFamOR2L8
HOVERGENQ8NGY9
HOGENOMQ8NGY9
Homologs : HomoloGeneOR2L8
Homology/Alignments : Family Browser (UCSC)OR2L8
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR2L8 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR2L8
dbVarOR2L8
ClinVarOR2L8
1000_GenomesOR2L8 
Exome Variant ServerOR2L8
ExAC (Exome Aggregation Consortium)OR2L8 (select the gene name)
Genetic variants : HAPMAP391190
Genomic Variants (DGV)OR2L8 [DGVbeta]
DECIPHEROR2L8 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR2L8 
Mutations
ICGC Data PortalOR2L8 
TCGA Data PortalOR2L8 
Broad Tumor PortalOR2L8
OASIS PortalOR2L8 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR2L8  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR2L8
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR2L8
DgiDB (Drug Gene Interaction Database)OR2L8
DoCM (Curated mutations)OR2L8 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR2L8 (select a term)
intoGenOR2L8
Cancer3DOR2L8(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR2L8
Genetic Testing Registry OR2L8
NextProtQ8NGY9 [Medical]
TSGene391190
GENETestsOR2L8
Target ValidationOR2L8
Huge Navigator OR2L8 [HugePedia]
snp3D : Map Gene to Disease391190
BioCentury BCIQOR2L8
ClinGenOR2L8
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD391190
Chemical/Pharm GKB GenePA32189
Clinical trialOR2L8
Miscellaneous
canSAR (ICR)OR2L8 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR2L8
EVEXOR2L8
GoPubMedOR2L8
iHOPOR2L8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:33:01 CEST 2017

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