Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

OR2M2 (olfactory receptor family 2 subfamily M member 2)

Identity

Alias_namesolfactory receptor, family 2, subfamily M, member 2
Alias_symbol (synonym)OST423
OR2M2Q
Other alias
HGNC (Hugo) OR2M2
LocusID (NCBI) 391194
Atlas_Id 71271
Location 1q44  [Link to chromosome band 1q44]
Location_base_pair Starts at 248179986 and ends at 248181029 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR2M2   8268
Cards
Entrez_Gene (NCBI)OR2M2  391194  olfactory receptor family 2 subfamily M member 2
AliasesOR2M2Q; OST423
GeneCards (Weizmann)OR2M2
Ensembl hg19 (Hinxton)ENSG00000198601 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000198601 [Gene_View]  chr1:248179986-248181029 [Contig_View]  OR2M2 [Vega]
ICGC DataPortalENSG00000198601
TCGA cBioPortalOR2M2
AceView (NCBI)OR2M2
Genatlas (Paris)OR2M2
WikiGenes391194
SOURCE (Princeton)OR2M2
Genetics Home Reference (NIH)OR2M2
Genomic and cartography
GoldenPath hg38 (UCSC)OR2M2  -     chr1:248179986-248181029 +  1q44   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR2M2  -     1q44   [Description]    (hg19-Feb_2009)
EnsemblOR2M2 - 1q44 [CytoView hg19]  OR2M2 - 1q44 [CytoView hg38]
Mapping of homologs : NCBIOR2M2 [Mapview hg19]  OR2M2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001004688
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR2M2
Cluster EST : UnigeneHs.534728 [ NCBI ]
CGAP (NCI)Hs.534728
Alternative Splicing GalleryENSG00000198601
Gene ExpressionOR2M2 [ NCBI-GEO ]   OR2M2 [ EBI - ARRAY_EXPRESS ]   OR2M2 [ SEEK ]   OR2M2 [ MEM ]
Gene Expression Viewer (FireBrowse)OR2M2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)391194
GTEX Portal (Tissue expression)OR2M2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96R28   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96R28  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96R28
Splice isoforms : SwissVarQ96R28
PhosPhoSitePlusQ96R28
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)7TM_GPCR_Srsx (SM01381)  
Conserved Domain (NCBI)OR2M2
DMDM Disease mutations391194
Blocks (Seattle)OR2M2
SuperfamilyQ96R28
Human Protein AtlasENSG00000198601
Peptide AtlasQ96R28
HPRD17703
IPIIPI00464969   
Protein Interaction databases
DIP (DOE-UCLA)Q96R28
IntAct (EBI)Q96R28
FunCoupENSG00000198601
BioGRIDOR2M2
STRING (EMBL)OR2M2
ZODIACOR2M2
Ontologies - Pathways
QuickGOQ96R28
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR2M2
Atlas of Cancer Signalling NetworkOR2M2
Wikipedia pathwaysOR2M2
Orthology - Evolution
OrthoDB391194
GeneTree (enSembl)ENSG00000198601
Phylogenetic Trees/Animal Genes : TreeFamOR2M2
HOVERGENQ96R28
HOGENOMQ96R28
Homologs : HomoloGeneOR2M2
Homology/Alignments : Family Browser (UCSC)OR2M2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR2M2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR2M2
dbVarOR2M2
ClinVarOR2M2
1000_GenomesOR2M2 
Exome Variant ServerOR2M2
ExAC (Exome Aggregation Consortium)OR2M2 (select the gene name)
Genetic variants : HAPMAP391194
Genomic Variants (DGV)OR2M2 [DGVbeta]
DECIPHEROR2M2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR2M2 
Mutations
ICGC Data PortalOR2M2 
TCGA Data PortalOR2M2 
Broad Tumor PortalOR2M2
OASIS PortalOR2M2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR2M2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR2M2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR2M2
DgiDB (Drug Gene Interaction Database)OR2M2
DoCM (Curated mutations)OR2M2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR2M2 (select a term)
intoGenOR2M2
Cancer3DOR2M2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR2M2
Genetic Testing Registry OR2M2
NextProtQ96R28 [Medical]
TSGene391194
GENETestsOR2M2
Target ValidationOR2M2
Huge Navigator OR2M2 [HugePedia]
snp3D : Map Gene to Disease391194
BioCentury BCIQOR2M2
ClinGenOR2M2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD391194
Chemical/Pharm GKB GenePA32192
Clinical trialOR2M2
Miscellaneous
canSAR (ICR)OR2M2 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR2M2
EVEXOR2M2
GoPubMedOR2M2
iHOPOR2M2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:33:01 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.